From: Jim Procter Date: Fri, 4 Oct 2024 16:06:44 +0000 (+0100) Subject: JAL-4473 whatsNew 2.11.4.1 X-Git-Tag: Release_2_11_4_1~3^2^2 X-Git-Url: http://source.jalview.org/gitweb/?a=commitdiff_plain;h=d5180397f74424e44495cffe9c822873fc974441;p=jalview.git JAL-4473 whatsNew 2.11.4.1 --- diff --git a/help/markdown/whatsnew/whatsnew-2_11_4_1.md b/help/markdown/whatsnew/whatsnew-2_11_4_1.md new file mode 100644 index 0000000..c102c29 --- /dev/null +++ b/help/markdown/whatsnew/whatsnew-2_11_4_1.md @@ -0,0 +1,26 @@ +The 2.11.4 series is the fourth in the minor-release trilogy planned for Jalview's 2.11 series. + +This release adds new capabilities for visualisation and clustering of protein secondary structure annotations, +along with enhanced control of the display and analysis of secondary structure from different +sources of 3D structure and prediction. + +The Calculations dialog has also been revised to accommodate a new implementation of +the spatial clustering method PASiMap +([Su et al. 2022 Comp. Struc. Biotech.](https://doi.org/10.1016/j.csbj.2022.09.034)) +which was added to Jalview by Thomas Morell and Jennifer Fleming. + +Jalview 2.11.4 also has new installers and command line scripts that bring several +minor improvements, and also makes it easier for IT admins to manage Jalview installations +on computers used by many different people. New installations of Jalview will by default +store updates in user's home directories, Automatic updates can also be disabled, and +updates instead carried out using a new jalview_update command line tool. + + + +Experimental features + +This release includes experimental support (enabled in the Tools menu) for +handling drag'n'drop of alignment, tree, annotations and feature file(s) +onto the Jalview Desktop. They can also be dragged onto the Jalview icon. + + \ No newline at end of file