From: BobHanson <hansonr@stolaf.edu>
Date: Thu, 28 May 2020 12:51:38 +0000 (-0500)
Subject: CR-JAL-220  JAL-3591  fixes for unlikely key value
X-Git-Url: http://source.jalview.org/gitweb/?a=commitdiff_plain;h=d55521c4db0fb537c343a28ce2294abf021eea3a;p=jalview.git

CR-JAL-220  JAL-3591  fixes for unlikely key value
---

diff --git a/src/jalview/appletgui/SeqPanel.java b/src/jalview/appletgui/SeqPanel.java
index 32f0abb..5570230 100644
--- a/src/jalview/appletgui/SeqPanel.java
+++ b/src/jalview/appletgui/SeqPanel.java
@@ -820,8 +820,9 @@ public class SeqPanel extends Panel implements MouseMotionListener,
     {
       if (av.getAlignment().isNucleotide())
       {
-        String base = ResidueProperties.nucleotideName.get(ch);
-        text.append(" Nucleotide: ").append(base == null ? ch : base);
+        String schar = "" + ch;
+        String base = ResidueProperties.nucleotideName.get(schar);
+        text.append(" Nucleotide: ").append(base == null ? schar : base);
       }
       else
       {
diff --git a/src/jalview/gui/JDatabaseTree.java b/src/jalview/gui/JDatabaseTree.java
index 8d62433..b05a609 100644
--- a/src/jalview/gui/JDatabaseTree.java
+++ b/src/jalview/gui/JDatabaseTree.java
@@ -122,7 +122,7 @@ public class JDatabaseTree extends JalviewDialog implements KeyListener
         {
           System.err.println("dupe ig for : " + dbs[i] + " \t"
                   + dbp.getDbName() + " (" + dbp.getDbSource() + ")");
-          source.remove(tn);
+          source.remove(dbs[i]);
         }
       }
     }