From: amwaterhouse <Andrew Waterhouse>
Date: Fri, 21 Jan 2005 18:32:49 +0000 (+0000)
Subject: Delete groups added, nucleotide color added
X-Git-Tag: Release_2_0~737
X-Git-Url: http://source.jalview.org/gitweb/?a=commitdiff_plain;h=d5e330e770d94e333309057f45969886a8fb2ad7;p=jalview.git

Delete groups added, nucleotide color added
---

diff --git a/src/jalview/jbgui/GAlignFrame.java b/src/jalview/jbgui/GAlignFrame.java
index fa90a6e..43dc81f 100755
--- a/src/jalview/jbgui/GAlignFrame.java
+++ b/src/jalview/jbgui/GAlignFrame.java
@@ -82,6 +82,8 @@ public class GAlignFrame extends JInternalFrame
   JMenu searchMenu = new JMenu();
   protected JCheckBoxMenuItem abovePIDThreshold = new JCheckBoxMenuItem();
   protected JCheckBoxMenuItem secondaryStructure = new JCheckBoxMenuItem();
+  protected JRadioButtonMenuItem nucleotideColour = new JRadioButtonMenuItem();
+  JMenuItem deleteGroups = new JMenuItem();
   public GAlignFrame()
   {
     try
@@ -133,6 +135,7 @@ public class GAlignFrame extends JInternalFrame
     colours.add(userDefinedColour);
     colours.add(PIDColour);
     colours.add(BLOSUM62Colour);
+    colours.add(nucleotideColour);
   }
   private void jbInit() throws Exception
   {
@@ -607,6 +610,23 @@ public class GAlignFrame extends JInternalFrame
         secondaryStructure_actionPerformed(actionEvent);
       }
     });
+    nucleotideColour.setText("Nucleotide colours");
+    nucleotideColour.addActionListener(new java.awt.event.ActionListener()
+    {
+      public void actionPerformed(ActionEvent e)
+      {
+        nucleotideColour_actionPerformed(e);
+      }
+    });
+    deleteGroups.setSelected(false);
+    deleteGroups.setText("Delete all groups");
+    deleteGroups.addActionListener(new java.awt.event.ActionListener()
+    {
+      public void actionPerformed(ActionEvent e)
+      {
+        deleteGroups_actionPerformed(e);
+      }
+    });
     alignFrameMenuBar.add(fileMenu);
     alignFrameMenuBar.add(editMenu);
     alignFrameMenuBar.add(searchMenu);
@@ -624,6 +644,7 @@ public class GAlignFrame extends JInternalFrame
     editMenu.add(undoMenuItem);
     editMenu.add(redoMenuItem);
     editMenu.addSeparator();
+    editMenu.add(deleteGroups);
     editMenu.add(groupsMenuItem);
     editMenu.addSeparator();
     editMenu.add(selectAllSequenceMenuItem);
@@ -658,6 +679,7 @@ public class GAlignFrame extends JInternalFrame
     colourMenu.add(strandColour);
     colourMenu.add(turnColour);
     colourMenu.add(buriedColour);
+    colourMenu.add(nucleotideColour);
     colourMenu.add(userDefinedColour);
     colourMenu.add(PIDColour);
     colourMenu.add(BLOSUM62Colour);
@@ -989,4 +1011,16 @@ public class GAlignFrame extends JInternalFrame
   {
 
   }
+
+  protected void nucleotideColour_actionPerformed(ActionEvent e)
+  {
+
+  }
+
+  protected void deleteGroups_actionPerformed(ActionEvent e)
+  {
+
+  }
+
+
 }