From: jprocter Date: Mon, 10 Apr 2006 14:29:02 +0000 (+0000) Subject: reworded pad gaps X-Git-Tag: Release_2_08~7 X-Git-Url: http://source.jalview.org/gitweb/?a=commitdiff_plain;h=dd68c87f51bd5c29113e4691cc63dd17488355b1;p=jalview.git reworded pad gaps --- diff --git a/help/html/menus/alwedit.html b/help/html/menus/alwedit.html index e3d1958..8e28a33 100755 --- a/help/html/menus/alwedit.html +++ b/help/html/menus/alwedit.html @@ -83,11 +83,13 @@ The "Undo" button will undo the last redundancy deletion.
  • Pad Gaps
    When selected, the alignment will be kept at minimal - width (no empty columns before or after the first or last aligned - residue). This is useful when making a tree using unaligned + width (so there no empty columns before or after the first or last aligned + residue) and all sequences will be padded with gap characters to + the before and after their terminating residues.
    + This switch is useful when making a tree using unaligned sequences and when working with alignment analysis programs which require 'properly aligned sequences' to be all the same length.
    - You may set the default gap character in preferences. + You may set the default for Pad Gaps in the preferences.
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