From: cmzmasek@gmail.com <cmzmasek@gmail.com@ca865154-3058-d1c3-3e42-d8f55a55bdbd>
Date: Sat, 29 Sep 2012 05:05:54 +0000 (+0000)
Subject: in progress
X-Git-Url: http://source.jalview.org/gitweb/?a=commitdiff_plain;h=df06dca79630b2e233a0955369372e7268fd03bb;p=jalview.git

in progress
---

diff --git a/forester/ruby/evoruby/lib/evo/io/parser/hmmscan_domain_extractor.rb b/forester/ruby/evoruby/lib/evo/io/parser/hmmscan_domain_extractor.rb
index 865424b..99c6ec5 100644
--- a/forester/ruby/evoruby/lib/evo/io/parser/hmmscan_domain_extractor.rb
+++ b/forester/ruby/evoruby/lib/evo/io/parser/hmmscan_domain_extractor.rb
@@ -78,7 +78,7 @@ module Evoruby
       max_domain_copy_number_per_protein = -1
       max_domain_copy_number_sequence    = ""
 
-      prev_sequence = nil
+      prev_sequence = ""
       prev_number   = nil
       prev_env_from = nil
       prev_env_to   = nil