From: gmungoc <g.m.carstairs@dundee.ac.uk>
Date: Fri, 5 Dec 2014 10:52:38 +0000 (+0000)
Subject: JAL-1614 flag 'protein' removed
X-Git-Tag: Jalview_2_9~134
X-Git-Url: http://source.jalview.org/gitweb/?a=commitdiff_plain;h=e06cc22092db00e50cc3e4a375f00a8ee2ca5a2a;p=jalview.git

JAL-1614 flag 'protein' removed
---

diff --git a/src/jalview/bin/Jalview.java b/src/jalview/bin/Jalview.java
index bca5051..ff1b180 100755
--- a/src/jalview/bin/Jalview.java
+++ b/src/jalview/bin/Jalview.java
@@ -79,11 +79,6 @@ public class Jalview
   }
 
   /**
-   * Put protein=true for get a protein example
-   */
-  private static boolean protein = false;
-
-  /**
    * main class for Jalview application
    * 
    * @param args
@@ -527,8 +522,7 @@ public class Jalview
     // ////////////////////
 
     if (!headless && file == null && vamsasImport == null
-            && jalview.bin.Cache.getDefault("SHOW_STARTUP_FILE", true)
-            && protein == true)
+            && jalview.bin.Cache.getDefault("SHOW_STARTUP_FILE", true))
     {
       file = jalview.bin.Cache.getDefault(
               "STARTUP_FILE",