From: Jim Procter <jprocter@issues.jalview.org>
Date: Tue, 14 Apr 2020 15:33:22 +0000 (+0100)
Subject: JAL-3529 revert ordering of DBRef addition so it reflects situation after Pfam import... 
X-Git-Tag: Develop-2_11_2_0-d20201215~35^2
X-Git-Url: http://source.jalview.org/gitweb/?a=commitdiff_plain;h=e0c07d892616e9c206b36f4d23c2b050b1ca8c9d;p=jalview.git

JAL-3529 revert ordering of DBRef addition so it reflects situation after Pfam import </picky>
---

diff --git a/test/jalview/io/StockholmFileTest.java b/test/jalview/io/StockholmFileTest.java
index 74825cf..9fdd7b9 100644
--- a/test/jalview/io/StockholmFileTest.java
+++ b/test/jalview/io/StockholmFileTest.java
@@ -107,9 +107,9 @@ public class StockholmFileTest
     // sequences retrieved in a Pfam domain alignment also have a PFAM database
     // reference
     SequenceI sq = new Sequence("FER2_SPIOL", "AASSDDDFFF");
-    sq.addDBRef(new DBRefEntry("PFAM", "1", "PF00111"));
     sq.addDBRef(new DBRefEntry("UNIPROT", "1", "P00224"));
     sq.addDBRef(new DBRefEntry("PFAM", "1", "P00224.1"));
+    sq.addDBRef(new DBRefEntry("PFAM", "1", "PF00111"));
     AppletFormatAdapter af = new AppletFormatAdapter();
     String toStockholm = af.formatSequences(FileFormat.Stockholm,
             new Alignment(new SequenceI[]