From: Jim Procter <jprocter@dundee.ac.uk>
Date: Wed, 11 Sep 2024 14:25:52 +0000 (+0100)
Subject: JAL-4428 codesign jnilibs
X-Git-Tag: Release_2_11_4_0~11^2~1^2
X-Git-Url: http://source.jalview.org/gitweb/?a=commitdiff_plain;h=e428c76d94fdfb3c8d3783b62c14ef555e693adc;p=jalview.git

JAL-4428 codesign jnilibs
---

diff --git a/utils/osx_signing/sign_and_staple_dmg.sh b/utils/osx_signing/sign_and_staple_dmg.sh
index e2bde9b..d79c04d 100755
--- a/utils/osx_signing/sign_and_staple_dmg.sh
+++ b/utils/osx_signing/sign_and_staple_dmg.sh
@@ -466,6 +466,41 @@ if [ "$SIGN" = 1 ]; then
   mycommand $DOSIGN codesign  --remove-signature --force --deep -vvvv -s "$DEVELOPERID" --options runtime --entitlements "$ENTITLEMENTSFILE" "$FILE"
   mycommand $DOSIGN codesign  --verify --deep -v "$FILE"
 
+
+  # Need to unpack and sign everything in here too
+  CWD=$(pwd)
+  mycommand $DOSIGN mkdir ${TEMPDIR}/jarsign
+  mycommand $DOSIGN cd ${TEMPDIR}/jarsign
+
+  JFILE="${APPPATH}/Contents/Resources/app/alt/libquaqua-8.0.jnilib.jar"
+  mycommand $DOSIGN jar xf "$JFILE" 
+
+  FILE="libquaqua.jnilib"
+  mycommand $DOSIGN codesign  --remove-signature --force --deep -vvvv -s "$DEVELOPERID" --options runtime --entitlements "$ENTITLEMENTSFILE" "$FILE"
+  mycommand $DOSIGN codesign  --verify --deep -v "$FILE"
+
+  mycommand $DOSIGN mv "$JFILE" "${JFILE}.old"
+  mycommand $DOSIGN jar cf "$JFILE" *
+  mycommand $DOSIGN rm "${JFILE}.old"
+
+
+  JFILE="${APPPATH}/Contents/Resources/app/alt/libquaqua64-8.0.jnilib.jar"
+  mycommand $DOSIGN jar xf "$JFILE" 
+
+  FILE="libquaqua64.jnilib"
+  mycommand $DOSIGN codesign  --remove-signature --force --deep -vvvv -s "$DEVELOPERID" --options runtime --entitlements "$ENTITLEMENTSFILE" "$FILE"
+  mycommand $DOSIGN codesign  --verify --deep -v "$FILE"
+
+  mycommand $DOSIGN mv "$JFILE" "${JFILE}.old"
+  mycommand $DOSIGN jar cf "$JFILE" *
+  mycommand $DOSIGN rm "${JFILE}.old"
+
+  mycommand $DOSIGN codesign  --remove-signature --force --deep -vvvv -s "$DEVELOPERID" --options runtime --entitlements "$ENTITLEMENTSFILE" "$JFILE"
+  mycommand $DOSIGN codesign  --verify --deep -v "$JFILE"
+
+  mycommand $DOSIGN cd $CWD
+  mycommand $DOSIGN rm -Rf ${TEMPDIR}/jarsign
+
   FILE="${APPPATH}/Contents/MacOS/JavaApplicationStub"
   mycommand $DOSIGN codesign  --remove-signature --force --deep -vvvv -s "$DEVELOPERID" --options runtime --entitlements "$ENTITLEMENTSFILE" "$FILE"
 fi