From: Jim Procter <j.procter@dundee.ac.uk>
Date: Wed, 2 Mar 2022 12:30:53 +0000 (+0000)
Subject: JAL-3746 update release date and release notes/docs for JAL-1260, JAL-3821, JAL-3144... 
X-Git-Tag: Release_2_11_2_1~55
X-Git-Url: http://source.jalview.org/gitweb/?a=commitdiff_plain;h=e69f7ec847b9dbbf88350521ccd3fd773c6aeaa8;p=jalview.git

JAL-3746 update release date and release notes/docs for JAL-1260, JAL-3821, JAL-3144, JAL-2226
---

diff --git a/help/help/html/io/fileformats.html b/help/help/html/io/fileformats.html
index af4e2c4..bdde33c 100755
--- a/help/help/html/io/fileformats.html
+++ b/help/help/html/io/fileformats.html
@@ -93,6 +93,19 @@ td {
       <td width="23%">.phy</td>
     </tr>
     <tr>
+      <td width="17%">EMBL</td>
+      <td width="60%">Line starts with ID, followed by a space, and
+        is followed by a 7 character identifier terminated with a
+        semicolon.</td>
+      <td width="23%">.txt</td>
+    </tr>
+    <tr>
+      <td width="17%">GenBank</td>
+      <td width="60%">Line starts with LOCUS
+      </td>
+      <td width="23%">.gb,.gbk</td>
+    </tr>
+    <tr>
       <td width="17%">JSON</td>
       <td width="60%">Data starts with '{' <br>Data ends with
         '}' <br> <br>See <a
diff --git a/help/help/html/releases.html b/help/help/html/releases.html
index 3b74773..a6293e6 100755
--- a/help/help/html/releases.html
+++ b/help/help/html/releases.html
@@ -59,7 +59,7 @@ li:before {
     <tr>
       <td width="60" align="center" nowrap><strong><a
           id="Jalview.2.11.2">2.11.2</a><a id="Jalview.2.11.2.0">.0</a><br />
-          <em>24/02/2022</em></strong></td>
+          <em>3/03/2022</em></strong></td>
       <td align="left" valign="top">
         <ul>
           <li>
@@ -72,7 +72,9 @@ li:before {
             memory settings at launch
           </li>
           <li>
-            <!-- JAL- -->
+            <!-- JAL-3144 -->Reverted to Jalview 'classic' drop-down
+            menu for selecting which database to fetch from in sequence
+            fetcher dialog.
           </li>
           <li>
             <!-- JAL- -->
@@ -81,13 +83,16 @@ li:before {
             <!-- JAL- -->
           </li>
           <li>
-            <!-- JAL- -->
+            <!-- JAL-2226 -->Structure annotation rows for all mapped
+            chains in 3D structures are included in the 'Reference
+            Annotation' for a sequence
           </li>
           <li>
-            <!-- JAL- -->
+            <!-- JAL-1260 -->Import Genbank and EMBL format flatfiles 
           </li>
           <li>
-            <!-- JAL- -->
+            <!-- JAL-3821 -->ENA record's mol_type honoured so RNA
+            molecules imported from ENA records are shown as RNA
           <li>
             <!-- JAL-3863 -->Support for Canonical Uniprot IDs
           </li>