From: amwaterhouse <Andrew Waterhouse>
Date: Mon, 11 Jul 2005 14:46:23 +0000 (+0000)
Subject: Must check if group.sequences are null in remove gaps
X-Git-Tag: Release_2_01~3
X-Git-Url: http://source.jalview.org/gitweb/?a=commitdiff_plain;h=ea6c49b695e8d44a1f4e05c51a78e8693e031fab;p=jalview.git

Must check if group.sequences are null in remove gaps
---

diff --git a/src/jalview/appletgui/AlignFrame.java b/src/jalview/appletgui/AlignFrame.java
index 491d2be..d320dc5 100755
--- a/src/jalview/appletgui/AlignFrame.java
+++ b/src/jalview/appletgui/AlignFrame.java
@@ -567,8 +567,9 @@ public class AlignFrame
 
     int start=0, end = viewport.alignment.getWidth();
 
-    if(viewport.getSelectionGroup()!=null
-     || viewport.getSelectionGroup().sequences.size()<1)
+    if (viewport.getSelectionGroup() != null
+        && viewport.getSelectionGroup().sequences != null
+        && viewport.getSelectionGroup().sequences.size()>0)
     {
       seqs = viewport.getSelectionGroup().sequences;
       start = viewport.getSelectionGroup().getStartRes();
diff --git a/src/jalview/gui/AlignFrame.java b/src/jalview/gui/AlignFrame.java
index 9ce03f4..cbbc635 100755
--- a/src/jalview/gui/AlignFrame.java
+++ b/src/jalview/gui/AlignFrame.java
@@ -917,8 +917,10 @@ public class AlignFrame extends GAlignFrame
         int start = 0;
         int end = viewport.alignment.getWidth();
 
+
         if (viewport.getSelectionGroup() != null
-            || viewport.getSelectionGroup().sequences.size()<1)
+            && viewport.getSelectionGroup().sequences != null
+            && viewport.getSelectionGroup().sequences.size()>0)
         {
             seqs = viewport.getSelectionGroup().sequences;
             start = viewport.getSelectionGroup().getStartRes();