From: tva <tva@10.205.251.175>
Date: Wed, 3 Jul 2019 12:45:22 +0000 (+0100)
Subject: JAL-2629 fix search scores being read in incorrectly
X-Git-Url: http://source.jalview.org/gitweb/?a=commitdiff_plain;h=fbed76ebd126ac6152be48a717c4350e3229b5a5;p=jalview.git

JAL-2629 fix search scores being read in incorrectly
---

diff --git a/src/jalview/hmmer/JackHMMER.java b/src/jalview/hmmer/JackHMMER.java
index 1731439..16dcebb 100644
--- a/src/jalview/hmmer/JackHMMER.java
+++ b/src/jalview/hmmer/JackHMMER.java
@@ -361,7 +361,7 @@ public class JackHMMER extends HmmerCommand
       annot.setEValue(dEValue);
 
       double dBitScore = Double.parseDouble(bitScore);
-      annot.setEValue(dBitScore);
+      annot.setBitScore(dBitScore);
 
       annot.setSequenceRef(seq);
       seq.addAlignmentAnnotation(annot);