From: amwaterhouse <Andrew Waterhouse>
Date: Wed, 30 Nov 2005 18:13:46 +0000 (+0000)
Subject: Load pdb file with applet
X-Git-Url: http://source.jalview.org/gitweb/?a=commitdiff_plain;h=ff5f2b888385f85e9fd99a226c9da098a06016d8;p=jalview.git

Load pdb file with applet
---

diff --git a/src/jalview/bin/JalviewLite.java b/src/jalview/bin/JalviewLite.java
index 1a2ba27..8527401 100755
--- a/src/jalview/bin/JalviewLite.java
+++ b/src/jalview/bin/JalviewLite.java
@@ -240,6 +240,25 @@ public class JalviewLite extends Applet
 
                 if(featuresFile!=null)
                   currentAlignFrame.parseFeaturesFile(featuresFile);
+
+                String pdbfile = applet.getParameter("PDBFILE");
+                if(pdbfile!=null)
+                {
+                  if(pdbfile.indexOf("://")==-1)
+                       pdbfile = getCodeBase() + pdbfile;
+
+                  String sequence = applet.getParameter("PDBSEQ");
+
+                  if(sequence!=null)
+                  {
+                    new MCview.AppletPDBViewer(pdbfile, "URL",
+                                               (Sequence)currentAlignFrame.getAlignViewport().getAlignment().findName(sequence),
+                                               currentAlignFrame.getSeqcanvas());
+
+
+                  }
+
+                }
             }
             else
             {