From: amwaterhouse <Andrew Waterhouse>
Date: Mon, 14 Nov 2005 18:35:14 +0000 (+0000)
Subject: Fix bug where all chains are called A
X-Git-Url: http://source.jalview.org/gitweb/?a=commitdiff_plain;h=ff6ddfa34521a2fe88482589ae973cd69d3514b5;p=jalview.git

Fix bug where all chains are called A
---

diff --git a/src/MCview/myAtom.java b/src/MCview/myAtom.java
index 75dec37..5eccbdf 100755
--- a/src/MCview/myAtom.java
+++ b/src/MCview/myAtom.java
@@ -32,7 +32,7 @@ public class myAtom {
     public String resName;
     public int resNumber;
     public int type;
-    public Color color;
+    public Color color = Color.lightGray;
     public String chain;
     public boolean isSelected = false;
 
@@ -41,24 +41,9 @@ public class myAtom {
         this.name = str.nextToken();
         this.resName = str.nextToken();
 
-        String tmpstr = new String();
+        this.chain = str.nextToken();
 
-        try {
-            tmpstr = str.nextToken();
-            this.resNumber = (new Integer(tmpstr).intValue());
-            this.chain = "A";
-            this.color = Color.lightGray;
-        } catch (NumberFormatException e) {
-            this.chain = tmpstr;
-
-            if (tmpstr.equals("A")) {
-                this.color = Color.lightGray;
-            } else {
-                this.color = Color.red;
-            }
-
-            this.resNumber = (new Integer(str.nextToken()).intValue());
-        }
+        this.resNumber = (new Integer(str.nextToken()).intValue());
 
         this.x = (float) (new Float(str.nextToken()).floatValue());
         this.y = (float) (new Float(str.nextToken()).floatValue());