From: Jim Procter <jprocter@issues.jalview.org>
Date: Wed, 9 Jun 2021 15:53:09 +0000 (+0100)
Subject: JAL-3840 don’t update the modal residue count for gaps
X-Git-Tag: Release_2_11_2_0~44
X-Git-Url: http://source.jalview.org/gitweb/?a=commitdiff_plain;h=refs%2Fheads%2Fpatch%2FJAL-3840_2_11_2;p=jalview.git

JAL-3840 don’t update the modal residue count for gaps
---

diff --git a/src/jalview/datamodel/ResidueCount.java b/src/jalview/datamodel/ResidueCount.java
index 6b52166..efab97c 100644
--- a/src/jalview/datamodel/ResidueCount.java
+++ b/src/jalview/datamodel/ResidueCount.java
@@ -212,7 +212,12 @@ public class ResidueCount
         counts[offset] = (short) ++newValue;
       }
     }
-    maxCount = Math.max(maxCount, newValue);
+
+    if (offset!=GAP_COUNT)
+    {
+      // update modal residue count
+      maxCount = Math.max(maxCount, newValue);
+    }
     return newValue;
   }