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JAL-3390 redraw structures if alignment only and hidden regions change
[jalview.git]
/
src
/
jalview
/
datamodel
/
AlignedCodonFrame.java
2017-10-03
gmungoc
JAL-2738 copy to spikes/mungo
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2017-08-21
gmungoc
Merge branch 'develop' into features/JAL-2446NCList
features/JAL-2446NCList
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commitdiff
2017-08-16
Jim Procter
JAL-2418 source formatting
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2017-06-14
gmungoc
JAL-2598 Sequence.getSequence return a copy of the...
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2016-10-28
Jim Procter
JAL-966 JAL-1738 JAL-345 interfaces for SearchResults...
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2016-10-25
Jim Procter
JAL-2089 patch broken merge to master for Release 2...
releases/Release_2_10_0_Branch
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2016-10-06
Jim Procter
JAL-2089 Merge branch releases/Release_2_10_Branch...
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2016-10-05
Jim Procter
JAL-2189 source formatting
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2016-07-06
gmungoc
JAL-2110 ensuring mapped dbrefs between protein and cds
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2016-07-04
gmungoc
JAL-2110 defensive check in code
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2016-07-01
gmungoc
JAL-2110 bug fixing and tidying for get cross-refs
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2016-06-16
Jim Procter
JAL-2110 equals and hashcode should check fromSeq
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2016-06-16
Jim Procter
JAL-2110 typo caused infinite loop
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2016-06-14
gmungoc
JAL-1686 JAL-2110 equals and/or hashCode method added
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2016-04-01
gmungoc
JAL-1705 ensure the right mapping is used to align...
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2016-04-01
gmungoc
JAL-1705 reworked AlignmentUtils.makeCdsAlignment and...
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2016-03-28
gmungoc
JAL-1705 Javadoc / debug output tweaks
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2016-02-19
gmungoc
JAL-1705 handle case of sequence with no dataset sequence
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2016-01-21
gmungoc
JAL-1705 isEmpty() and (debug) toString() methods added
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2015-12-22
gmungoc
JAL-653 AlignedCodonFrame internal refactor, merge...
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2015-11-30
gmungoc
JAL-653 (experimental) methods to resolve dummy to...
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2015-10-16
Jim Procter
JAL-1925 update source version in license
Release_2_9_0b2
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2015-10-08
Jim Procter
JAL-1894 update year/version in copyright
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2015-09-22
Jim Procter
Merge branch 'develop' into Release_2_9_0b1_Branch
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2015-09-14
gmungoc
JAL-1880 handle sequence offsets properly when mapping...
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2015-09-10
Jim Procter
JAL-1645 Version-Rel Version 2.9 Year-Rel 2015 Licensin...
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diff to current
2015-09-10
Jim Procter
JAL-1645 source formatting and organise imports
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2015-06-05
Jim Procter
JAL-1551 formatting
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2015-04-14
gmungoc
JAL-1693 generate multiple exon sequences for 1-many...
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2015-03-26
gmungoc
Merge develop to Release_2_8_3_Branch
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2015-03-06
Jim Procter
JAL-1683 replace year/version strings with tokens in...
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2014-12-15
Jim Procter
JAL-1620 version bump and release notes
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2014-06-06
Jim Procter
JAL-1517 source formatting
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2014-06-06
Jim Procter
JAL-1517 fix copyright for 2.8.2
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2014-06-05
Jim Procter
JAL-1517 update copyright to version 2.8.2
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2014-05-22
Jim Procter
JAL-1503 update version in GPL header
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2014-01-29
Jim Procter
JAL-1432 updated copyright notices
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2013-06-17
Jim Procter
JAL-1312 patch for regression noticed after patch to...
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2012-10-22
jprocter
Jalview 2.8 Source Header
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2011-10-10
jprocter
update author list in license for (JAL-826)
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2011-09-27
jprocter
apply version 2.7 copyright
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2010-09-23
jprocter
Jalview 2.6 source licence
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2010-04-30
jprocter
jalview 2.5 release banner
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2009-06-08
jprocter
apply gpl development license
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2008-09-04
jprocter
merge from 2_4_Release branch
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2007-12-21
jprocter
temporary bugfix ?
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2007-07-13
jprocter
mapping bug fixes
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2007-06-17
jprocter
AlignedCodonFrame holds mapping information between...
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