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Read startgroup and endgroup in features file
[jalview.git]
/
src
/
jalview
/
gui
/
2005-09-22
amwaterhouse
Wrap alignment with annotations
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commitdiff
2005-09-21
amwaterhouse
Jalview
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commitdiff
2005-09-21
amwaterhouse
Sequences must be aligned before PCA
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commitdiff
2005-09-21
amwaterhouse
Next active Frame losing focus bug fixed
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commitdiff
2005-09-20
amwaterhouse
Checks end of sequence before drawing text
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commitdiff
2005-09-20
amwaterhouse
PCAPanel just requires viewport
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commitdiff
2005-09-20
amwaterhouse
Help gets bounds from help map file
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commitdiff
2005-09-20
amwaterhouse
New methods in treePanel
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commitdiff
2005-09-20
amwaterhouse
Null pointer if user presses shift before anything...
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commitdiff
2005-09-20
amwaterhouse
Align labels format left
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commitdiff
2005-09-20
amwaterhouse
Optimise graphics copy object
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commitdiff
2005-09-20
amwaterhouse
Use selectionGroup to find chosen sequences
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commitdiff
2005-09-20
amwaterhouse
Make sure fontmetrics is not null
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commitdiff
2005-09-19
amwaterhouse
Make sure fontmetrics exists for headless state
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commitdiff
2005-09-19
amwaterhouse
Dont add ServiceListeners if desktop is null
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commitdiff
2005-09-19
amwaterhouse
Alignment of node labels modified
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commitdiff
2005-09-19
amwaterhouse
ShowDistances, placeHolders and bootstraps have their...
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commitdiff
2005-09-16
amwaterhouse
Check image is not null in fast paint
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commitdiff
2005-09-16
amwaterhouse
Set distanceMenu selected true
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commitdiff
2005-09-15
amwaterhouse
OptionPane warning for out of memory
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commitdiff
2005-09-15
amwaterhouse
remove system.out
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commitdiff
2005-09-15
amwaterhouse
Remove key listener
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commitdiff
2005-09-14
amwaterhouse
Move bootStrap/distance settings outside thread
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commitdiff
2005-09-14
amwaterhouse
Add end of consensus test for wrapped edit
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commitdiff
2005-09-14
amwaterhouse
Make new frame selected
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commitdiff
2005-09-14
amwaterhouse
Copy and paste uses FASTA format
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commitdiff
2005-09-14
amwaterhouse
Call methods in treeCanvas on init
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commitdiff
2005-09-14
amwaterhouse
offy changes
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commitdiff
2005-09-14
amwaterhouse
OutOfMemory try catch
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commitdiff
2005-09-14
amwaterhouse
Use font size, not font height
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commitdiff
2005-09-14
amwaterhouse
Use getTreeFont instead of getFont
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commitdiff
2005-09-14
amwaterhouse
use fontchooser to change fonts
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commitdiff
2005-09-14
amwaterhouse
Center labels
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commitdiff
2005-09-14
amwaterhouse
Save fonts for trees
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commitdiff
2005-09-14
amwaterhouse
Change fonts in Treepanel
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commitdiff
2005-09-14
amwaterhouse
Add header
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commitdiff
2005-09-14
amwaterhouse
System.gc after outofmemory
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commitdiff
2005-09-14
amwaterhouse
PCA is in outofmemory try-catch
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commitdiff
2005-09-13
amwaterhouse
Dont respond to mouse movements if alignment wrapped
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commitdiff
2005-09-13
amwaterhouse
Give focus to textarea on startup
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commitdiff
2005-09-13
amwaterhouse
EPSOptions added
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commitdiff
2005-09-13
amwaterhouse
Warn if out of memory
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commitdiff
2005-09-12
amwaterhouse
Remove gaps in regions, not char by char
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commitdiff
2005-09-12
amwaterhouse
null pointers removed
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commitdiff
2005-09-12
amwaterhouse
Null pointers removed
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commitdiff
2005-09-12
amwaterhouse
Dont fastpaint if movement is zero
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commitdiff
2005-09-12
amwaterhouse
Update overview after change
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commitdiff
2005-09-12
amwaterhouse
Update overview in alignmentChanged
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commitdiff
2005-09-12
amwaterhouse
Size checking in drawGraph
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commitdiff
2005-09-12
amwaterhouse
Overview subsamples alignment
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commitdiff
2005-09-08
amwaterhouse
Move tree property change to treePanel
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commitdiff
2005-09-08
amwaterhouse
Only 1 NJtree
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commitdiff
2005-09-08
amwaterhouse
Init PCA in thread
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commitdiff
2005-09-08
amwaterhouse
If no consensus, disable certain colour options
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commitdiff
2005-09-08
amwaterhouse
update consensus and conservation are in try catch...
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commitdiff
2005-09-08
amwaterhouse
Optimise switch to fastPaint
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commitdiff
2005-09-08
amwaterhouse
Correct mouse pressed bug
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commitdiff
2005-09-08
amwaterhouse
Optimised for wide alignments
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commitdiff
2005-09-08
amwaterhouse
Load in a thread
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commitdiff
2005-09-01
amwaterhouse
firePropertyChange if sequences deleted
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commitdiff
2005-09-01
amwaterhouse
Use propertyListener for alignment edits
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commitdiff
2005-09-01
amwaterhouse
Sort by added to preferences
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commitdiff
2005-09-01
amwaterhouse
No need to recalculate image for font change
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commitdiff
2005-08-30
amwaterhouse
Set user colours same as global
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commitdiff
2005-08-30
amwaterhouse
Repaint annotations after edit
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commitdiff
2005-08-30
amwaterhouse
Wrapped, getWidth > vconsensus
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commitdiff
2005-08-30
amwaterhouse
Update colours after remove left, cut, paste
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commitdiff
2005-08-30
amwaterhouse
Keep mouse drag to 1 block when wrapped
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commitdiff
2005-08-30
amwaterhouse
Dont setSelected on new frames
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commitdiff
2005-08-30
amwaterhouse
Out of bounds checks
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commitdiff
2005-08-30
amwaterhouse
Set startSeq 0 if wrap alignment
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commitdiff
2005-08-29
amwaterhouse
Reset all colour schemes after gaps removed
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commitdiff
2005-08-29
amwaterhouse
Include None in default colours
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commitdiff
2005-08-29
amwaterhouse
Keep startRes the same after removing columns
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commitdiff
2005-08-29
amwaterhouse
Reset ClustalX after removing gaps
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commitdiff
2005-08-29
amwaterhouse
load sequenceURLLinks static method
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commitdiff
2005-08-29
amwaterhouse
Edit and annotate wrapped alignment
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commitdiff
2005-08-29
amwaterhouse
Edit and annotate wrapped alignment
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commitdiff
2005-08-29
amwaterhouse
Edit and annotate wrapped alignment
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commitdiff
2005-08-26
amwaterhouse
Create new image only on resize, set fontMetrics on...
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commitdiff
2005-08-26
amwaterhouse
No need to call repaint after font change
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commitdiff
2005-08-26
amwaterhouse
resizeAgain flag set if user resizes whilst image is...
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commitdiff
2005-08-26
amwaterhouse
Update overviewImage if font changed
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commitdiff
2005-08-26
amwaterhouse
When saving, use print instead of println
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commitdiff
2005-08-24
amwaterhouse
Set new group width-1
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commitdiff
2005-08-24
amwaterhouse
Give extra pixel for graph values
Release_2_04
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commitdiff
2005-08-24
amwaterhouse
Bring trees to front
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commitdiff
2005-08-24
amwaterhouse
Does edit affect any groups?
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commitdiff
2005-08-24
amwaterhouse
Dont set iframe null
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commitdiff
2005-08-23
amwaterhouse
Latest version is red
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commitdiff
2005-08-23
amwaterhouse
End res of selection group corrected
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commitdiff
2005-08-23
amwaterhouse
AddToDesktop is synchronized
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commitdiff
2005-08-23
amwaterhouse
Warning no longer red
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commitdiff
2005-08-23
amwaterhouse
Dont make new frame reference in Buildwebservicemenu
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commitdiff
2005-08-23
amwaterhouse
Set size and location of frame before visible
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commitdiff
2005-08-22
amwaterhouse
Check for null colour
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commitdiff
2005-08-22
amwaterhouse
Dont resize frame if bounds have been set
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commitdiff
2005-08-22
amwaterhouse
Mosue wheel moved to seqpanel
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commitdiff
2005-08-22
amwaterhouse
Use mouse wheel press to zoom
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commitdiff
2005-08-22
amwaterhouse
Checks for null colour in groups
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commitdiff
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