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JAL-3683 retrieve job status to output stream
[jalview.git]
/
src
/
jalview
/
ws
/
2020-07-08
Mateusz Warowny
JAL-3683 retrieve job status to output stream
feature/JAL-3686_slivka_client_js_update
tree
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commitdiff
2020-07-08
Mateusz Warowny
JAL-6386 update slivka client for j2s compatibility
tree
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commitdiff
2020-02-04
MMWarowny
JAL-3515 Extract core WSDiscoverer methods to a separat...
tree
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commitdiff
2019-12-05
MMWarowny
JAL-3066 Comment on ambiguous parameter parsing.
tree
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commitdiff
2019-12-05
MMWarowny
JAL-3066 Change Slivka connection to https
tree
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commitdiff
2019-11-28
MMWarowny
JAL-3066 Fix incorrect URL resolving with /slivka prefix.
tree
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commitdiff
2019-11-15
MMWarowny
JAL-3066 Change server to compbio.dundee.ac.uk/slivka
tree
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commitdiff
2019-11-04
MMWarowny
Include missing job states.
tree
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commitdiff
2019-10-11
Mateusz Warowny
JAL-3066 Create labels for fields and hack it to work...
tree
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commitdiff
2019-10-11
Mateusz Warowny
Merge remote-tracking branch 'origin/tasks/JAL-3070_wsi...
tree
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commitdiff
2019-10-11
Mateusz Warowny
JAL-3066 change service type naming to avoid menu entry...
tree
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commitdiff
2019-10-10
Jim Procter
JAL-3070 set calcId and autocalculated flags for annota...
tasks/JAL-3070_wsinterfaces
tree
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commitdiff
2019-10-10
Jim Procter
Merge branch 'tasks/JAL-3070_wsinterfaces' into alpha...
tree
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commitdiff
2019-10-10
Jim Procter
JAL-3070 registerWorker start its thread automatically...
tree
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commitdiff
2019-10-09
Mateusz Warowny
JAL-3066 Read parameters directly from args list allowi...
tree
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commitdiff
2019-10-09
Mateusz Warowny
JAL-3066 Fix log files retrieval.
tree
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commitdiff
2019-10-07
Mateusz Warowny
Jal-3066 Retrieve job log and error log from the server.
tree
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commitdiff
2019-10-07
Jim Procter
Revert "JAL-3070 JAL-3066 fix initialisation of slivka...
tree
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commitdiff
2019-10-07
Mateusz Warowny
JAL-3066 AACon: pass the instance name of the service...
tree
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commitdiff
2019-10-07
Mateusz Warowny
JAL-3066 Check if annotation and features are present...
tree
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commitdiff
2019-10-07
Jim Procter
JAL-3066 report job ID when submitted
tree
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commitdiff
2019-10-07
Jim Procter
JAL-3066 debug info: check response when adding feature...
tree
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commitdiff
2019-10-07
Jim Procter
JAL-3066 JAL-3070 AACon: pass the name of the service...
tree
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commitdiff
2019-10-07
Jim Procter
JAL-3066 hack to instantiate the correct client accordi...
tree
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commitdiff
2019-10-07
Jim Procter
JAL-3070 JAL-3066 provide standard concrete instances...
tree
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commitdiff
2019-10-07
Jim Procter
JAL-3070 JAL-3066 fix initialisation of slivka ServiceW...
tree
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commitdiff
2019-10-07
Jim Procter
JAL-3070 formatting
tree
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commitdiff
2019-10-03
Jim Procter
JAL-3070 reinstate the internal test service URL for...
tree
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commitdiff
2019-10-03
Jim Procter
JAL-3070 slivka service discovery as a background threa...
tree
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commitdiff
2019-10-03
Jim Procter
JAL-3070 alignment analysis service worker UI and setti...
tree
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commitdiff
2019-10-03
Jim Procter
JAL-3070 call checkDone() ASAP to avoid race condition...
tree
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commitdiff
2019-10-02
Jim Procter
JAL-3070 decouple WsMenuEntryProviderI code from JABAWS
tree
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commitdiff
2019-10-02
Jim Procter
JAL-3070 reorganise prior to refactor
tree
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commitdiff
2019-10-02
Jim Procter
JAL-3070 make AlignCalcUI service code work only with...
tree
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commitdiff
2019-10-02
Jim Procter
JAL-3070 discoverers return ServiceWithParameter, now...
tree
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commitdiff
2019-10-02
Jim Procter
JAL-3070 decontaminate the ‘preferred service’ methods...
tree
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commitdiff
2019-10-02
Jim Procter
JAL-3070 JAL-3062 tidy up slivka ws menu builder and...
tree
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commitdiff
2019-10-02
Jim Procter
JAL-3070 detect failed/broken annotation web service...
tree
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commitdiff
2019-10-02
Jim Procter
JAL-3070 pull up generic methods for an automatic align...
tree
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commitdiff
2019-10-02
Jim Procter
JAL-3070 TODO
tree
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commitdiff
2019-10-01
Mateusz Warowny
JAL-3066 Sequence annotation services.
tree
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commitdiff
2019-09-27
Mateusz Warowny
JAL-3066 Automatically discoverable Protein sequence...
tree
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commitdiff
2019-09-26
Jim Procter
JAL-3070 oops - refactor Slivka’s service stub too :)
tree
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commitdiff
2019-09-26
Jim Procter
JAL-3070 JAL-3066 JAL-3067 refactor annotation web...
tree
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commitdiff
2019-09-24
Jim Procter
JAL-3070 tidying
tree
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commitdiff
2019-09-23
Jim Procter
JAL-3066 JAL-3070 pull up non-jabaws specific service...
tree
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commitdiff
2019-09-23
Mateusz Warowny
JAL-3066 Annotation Service Instance stub
tree
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commitdiff
2019-09-23
Mateusz Warowny
SlivkaWSDiscoverer formatting fix
tree
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commitdiff
2019-09-23
Mateusz Warowny
JAL-3066 Move common web service methods to abstract...
tree
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commitdiff
2019-09-23
Jim Procter
JAL-3070 configure annotation service manager from...
tree
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commitdiff
2019-09-23
Jim Procter
JAL-3070 rename AbstractJabaCalcWorker to SeqAnnotation...
tree
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commitdiff
2019-09-23
Jim Procter
JAL-3070 ensure RNAAliFold annotation rows display...
tree
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commitdiff
2019-09-23
Jim Procter
JAL-3070 formatting
tree
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commitdiff
2019-09-23
Jim Procter
JAL-3070 detect presence of existing JABA RNAAliFold...
tree
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commitdiff
2019-09-23
Jim Procter
JAL-3070 match AbstractJabaCalcWorker’s annotation...
tree
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commitdiff
2019-09-23
Jim Procter
JAL-3070 javadoc for (mostly) jabaws specific methods
tree
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commitdiff
2019-09-20
Jim Procter
JAL-3070 rough-and-ready refactor of JABA SequenceAnnot...
tree
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commitdiff
2019-09-20
Jim Procter
JAL-3070 JAL-1379 deferred work on annotation based...
tree
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commitdiff
2019-09-19
Mateusz Warowny
JAL-3066 Auto discover multiple sequence alignment...
tree
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commitdiff
2019-09-16
Mateusz Warowny
Set the initial value of the choice field to the defaul...
tree
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commitdiff
2019-09-16
Mateusz Warowny
Add the remaining msa services to the Discoverer
tree
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commitdiff
2019-09-11
Mateusz Warowny
Change choice field to use dropbox instead of radio...
tree
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commitdiff
2019-09-11
Mateusz Warowny
Create generic msa service instance
tree
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commitdiff
2019-09-06
Mateusz Warowny
Merge remote-tracking branch 'origin/alpha/JAL-3066_Jal...
tree
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commitdiff
2019-09-06
Mateusz Warowny
JAL-3066 Working custom parameters for clustalo
tree
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commitdiff
2019-09-06
Jim Procter
JAL-3066 fix compile error (@matesuz - this will confli...
tree
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commitdiff
2019-09-06
Jim Procter
JAL_1426 JAL-3066 update Apache James mime parser and...
tree
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commitdiff
2019-09-05
Mateusz Warowny
JAL-3066 Implement clustaloWS using slivka system.
tree
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commitdiff
2019-07-10
Jim Procter
JAL-3070 standard way of storing/recovering documentati...
tree
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commitdiff
2019-07-10
Jim Procter
JAL-3070 remove final reference to Jws2Instance
tree
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commitdiff
2019-07-10
Jim Procter
Merge branch 'tasks/JAL-3070_wsinterfaces' into alpha...
tree
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commitdiff
2019-07-10
Jim Procter
Merge branch 'merge/JAL-3285_mchmmer_with_211_develop...
tree
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commitdiff
2019-06-26
Jim Procter
JAL-3332 test to check for duplicate db sources and...
tree
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commitdiff
2019-06-24
Jim Procter
JAL-3330 dbreffetcher: record any feature display model...
tree
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commitdiff
2019-06-04
Jim Procter
Merge branch 'develop' into developtomchmmer
tree
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commitdiff
2019-04-23
Jim Procter
Merge branch 'develop' into bug/JAL-3224_getdown_change...
tree
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commitdiff
2019-04-15
gmungoc
JAL-3193 no separatge EnsemblGenomes source in Sequence...
tree
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commitdiff
2019-03-21
Ben Soares
JAL-3130 Replaced deprecated Class.newInstance() with...
tree
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commitdiff
2019-03-20
Ben Soares
JAL-3130 Lots of deprecation fixes. See utils/deprecat...
tree
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commitdiff
2019-03-06
gmungoc
Merge branch 'tasks/JAL-3035_remove_dasobert_dependency...
tree
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commitdiff
2019-03-06
gmungoc
JAL-3035 more das bits removed
tree
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commitdiff
2019-03-04
gmungoc
Merge branch 'bug/JAL-3120restoreFeatureColour' into...
tree
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commitdiff
2019-01-17
Jim Procter
JAL-3116 clear out whitespace when materialising Sequen...
tree
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commitdiff
2019-01-16
Jim Procter
Merge branch 'features/pca_jaxb_datasetrefs_JAL-3171_JA...
tree
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commitdiff
2018-12-17
Jim Procter
Merge branch 'develop' into bug/JAL-2541cutRelocateFeatures
tree
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commitdiff
2018-12-06
Ben Soares
JAL-3130 incorporating feature/JAL-3063jaxbNoCastor...
tree
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commitdiff
2018-09-21
gmungoc
JAL-3120 preserve feature colour/mincolour/maxcolour...
bug/JAL-3120restoreFeatureColour
tree
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commitdiff
2018-09-17
gmungoc
JAL-3116 unit tests adapted to EMBL over JAXB
tree
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commitdiff
2018-09-14
gmungoc
JAL-3116 parse EMBL XML with JAXB (todo: update unit...
tree
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commitdiff
2018-09-13
gmungoc
JAL-3116 Uniprot XML unmarshalled using JAXB not Castor
tree
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commitdiff
2018-09-11
Jim Procter
Merge branch 'develop' into releases/Release_2_11_Branch
tree
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commitdiff
2018-08-06
Jim Procter
JAL-3070 additional interfaces for web services (not...
tree
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commitdiff
2018-08-03
Jim Procter
JAL-3070 MsaWSClient doens’t depend on Jws2Instance...
tree
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commitdiff
2018-08-03
Jim Procter
JAL-3070 web service handle with UIinfo.hasParameters...
tree
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commitdiff
2018-08-02
Jim Procter
JAL-3070 base interface for service endpoint implementa...
tree
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commitdiff
2018-08-02
Jim Procter
JAL-3070 set host URL correctly from parsed description...
tree
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commitdiff
2018-08-01
Jim Procter
JAL-3070 refactored Client specific code from jalview...
tree
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commitdiff
2018-07-27
Jim Procter
JAL-3070 pull up sequence anonymisation hash, presets...
tree
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commitdiff
2018-07-26
Jim Procter
JAL-3070 pull up logic for offering a parameters dialog...
tree
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commitdiff
2018-07-26
Jim Procter
JAL-3070 abstract class for services with adjustable...
tree
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commitdiff
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