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JAL-1601 Create SecStructPredTask class
[jalview.git]
/
src
/
jalview
/
ws2
/
2023-10-13
Mateusz Warowny
JAL-1601 Create SecStructPredTask class
tree
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commitdiff
2023-10-13
Mateusz Warowny
JAL-1601 Load and display JPred4 service in AlignFrame
tree
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commitdiff
2023-10-13
Mateusz Warowny
JAL-1601 Implement JPred4 WS client and discoverer
tree
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commitdiff
2023-10-05
Mateusz Warowny
JAL-1601 Create action and task for sec. str. pred...
tree
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commitdiff
2023-10-05
Mateusz Warowny
JAL-1601 Implement JPred4 client and discoverer
tree
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commitdiff
2023-10-05
Mateusz Warowny
JAL-1601 Add sec str pred provider and client interfaces
tree
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commitdiff
2023-09-14
Mateusz Warowny
JAL-4241 Flter empty columns from annotation service...
mmw/bug/JAL-4241-annotation-alignment-fix-slivka
tree
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commitdiff
2023-09-12
Mateusz Warowny
JAL-4241 Fix non-standard residues replacement.
tree
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commitdiff
2023-07-31
Mateusz Warowny
JAL-4241 Fix annotation and feature alignment with...
tree
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commitdiff
2023-07-17
Mateusz Warowny
JAL-4232 Disable menu items for RNA services for proteins.
patch/JAL-4232-disable-unavailable-services
tree
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commitdiff
2023-07-14
Mateusz Warowny
Merge branch 'feature/JAL-3954-ebi-phmmer' into mmw...
mmw/JAL-4199-task-execution-update
tree
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commitdiff
2023-07-12
Mateusz Warowny
JAL-4199 Fix cancel button not appearing on progress bar
tree
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commitdiff
2023-07-12
Mateusz Warowny
JAL-4199 Restore deletable test when removing workers
tree
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commitdiff
2023-07-12
Mateusz Warowny
JAL-4199 Remove viewport reference from AnnotationTask
tree
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commitdiff
2023-07-12
Mateusz Warowny
JAL-4199 Fix slivka client to parse feature fileters
tree
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commitdiff
2023-07-12
Mateusz Warowny
JAL-4199 remove viewport references from AlignmentTask
tree
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commitdiff
2023-07-12
Mateusz Warowny
JAL-4199 Fix interactive jobs not being stopped
tree
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commitdiff
2023-07-12
Mateusz Warowny
JAL-4199 Organise AlignCalcWorkerAdapter imports
tree
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commitdiff
2023-07-12
Mateusz Warowny
JAL-4199 Implement toString in BaseTask
tree
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commitdiff
2023-07-12
Mateusz Warowny
JAL-4199 Organise annotation task imports and fields
tree
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commitdiff
2023-07-12
Mateusz Warowny
JAL-4199 Set initial delay of task executor to 0
tree
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commitdiff
2023-07-12
Mateusz Warowny
JAL-4199 Remove commented out code
tree
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commitdiff
2023-07-12
Mateusz Warowny
JAL-4199 Perform null check for annotation sequenceRef
tree
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commitdiff
2023-07-12
Mateusz Warowny
JAL-4199 Remove utility methods moved to other classes...
tree
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commitdiff
2023-07-12
Mateusz Warowny
JAL-4199 Schedule tasks for execution from MenuManager
tree
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commitdiff
2023-07-12
Mateusz Warowny
JAL-4199 Tidy up imports
tree
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commitdiff
2023-07-12
Mateusz Warowny
JAL-4199 Update gui handler for annotation tasks
tree
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commitdiff
2023-07-12
Mateusz Warowny
JAL-4199 Implement AlignCalcWorker adapter for annot...
tree
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commitdiff
2023-07-12
Mateusz Warowny
JAL-4199 Fix method name typo
tree
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commitdiff
2023-07-12
Mateusz Warowny
JAL-4199 Make all TaskEventListener methods default
tree
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commitdiff
2023-07-12
Mateusz Warowny
JAL-4199 Remove taskRestarted from task events
tree
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commitdiff
2023-07-12
Mateusz Warowny
JAL-4199 Allow multiple listeners in TaskEventSupport
tree
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commitdiff
2023-07-12
Mateusz Warowny
JAL-4199 Change actions to be task factories
tree
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commitdiff
2023-07-12
Mateusz Warowny
JAL-4199 Replace AbstractPollingTask with BaseTask
tree
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commitdiff
2023-06-22
Mateusz Warowny
JAL-4199 Initialize jobs and tasks with status CREATED
tree
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commitdiff
2023-06-14
Mateusz Warowny
JAL-4199 Test URL settings and basic service discovery
tree
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commitdiff
2023-06-14
Mateusz Warowny
JAL-4199 Update slivka client
tree
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commitdiff
2023-06-02
Mateusz Warowny
JAL-3954 Do not retrieve alignment for failed jobs
feature/JAL-3954-ebi-phmmer
tree
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commitdiff
2023-06-02
Mateusz Warowny
JAL-3954 Report error log when job fails
tree
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commitdiff
2023-06-02
Mateusz Warowny
JAL-3954 Add query sequence aligned to consensus to...
tree
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commitdiff
2023-06-02
Mateusz Warowny
JAL-3954 reuse spinner dialog to show search task status
tree
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commitdiff
2023-05-30
Mateusz Warowny
JAL-3954 create primitive gui handler for search service
tree
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commitdiff
2023-05-16
Mateusz Warowny
JAL-3954 Implement phmmer action and task as alignment...
tree
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commitdiff
2023-05-16
Mateusz Warowny
JAL-3954 Log events TaskEventListener.NULL_LISTENER
tree
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commitdiff
2023-05-10
Mateusz Warowny
JAL-3954 Create fallback for handling unknown actions
tree
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commitdiff
2023-05-10
Mateusz Warowny
JAL-3954 Implement job dispatcher service discoverer
tree
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commitdiff
2023-05-10
Mateusz Warowny
JAL-3954 Implement NullAction and NullTask for testing...
tree
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commitdiff
2023-05-10
Mateusz Warowny
JAL-3954 Fix typo in error message
tree
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commitdiff
2023-05-08
Mateusz Warowny
JAL-3954 Implement proxy ws client for phmmer
tree
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commitdiff
2023-05-08
Mateusz Warowny
JAL-3954 Create getters for Credentials record
tree
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commitdiff
2023-05-08
Mateusz Warowny
JAL-3954 Create ParamDatastore builder for phmmer
tree
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commitdiff
2023-03-01
Mateusz Warowny
JAL-4136 Replace uses of isBlank with isEmpty
tree
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commitdiff
2023-02-24
Mateusz Warowny
JAL-4135 replace stream.toString(Charset) calls with...
tree
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commitdiff
2023-02-22
Mateusz Warowny
JAL-4130 Replace Collection#forEach call with for loop
tree
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commitdiff
2023-02-22
Mateusz Warowny
JAL-4130 Avoid using thenComparing of the Comparator...
tree
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commitdiff
2023-02-17
Mateusz Warowny
JAL-4131 Replace usages of requireNonNullElse
tree
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commitdiff
2023-02-16
Mateusz Warowny
JAL-4130 Workaround the j2s issue with final variables...
tree
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commitdiff
2023-02-06
Mateusz Warowny
JAL-3878 Change Cache.log calls to Console
tree
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commitdiff
2022-04-26
Mateusz Warowny
JAL-3878 Implement RNA Sec. Str. Pred. discovery for...
JAL-3878_ws-overhaul-3
tree
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commitdiff
2022-04-25
Mateusz Warowny
JAL-3878 Fix edit settings dialog prompting to discard...
tree
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commitdiff
2022-04-11
Mateusz Warowny
JAL-3878 Use slivka client's URL when building web...
tree
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commitdiff
2022-04-11
Mateusz Warowny
JAL-3878 Add conservation service discovery
tree
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commitdiff
2022-04-11
Mateusz Warowny
JAL-3878 Build interactive services menu
tree
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commitdiff
2022-04-11
Mateusz Warowny
JAL-3878 Implement prot. seq. an. discovery for slivka.
tree
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commitdiff
2022-04-11
Mateusz Warowny
JAL-3878 Implement gui elements for annotation servicces
tree
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commitdiff
2022-04-11
Mateusz Warowny
JAL-3878 Create SlivkaAnnotationWSClient
tree
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commitdiff
2022-04-11
Mateusz Warowny
JAL-3878 Add full name getter to ActionI
tree
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commitdiff
2022-04-11
Mateusz Warowny
JAL-3878 Log status changes in annotation task
tree
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commitdiff
2022-04-11
Mateusz Warowny
JAL-3878 Allow null value for action name
tree
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commitdiff
2022-04-07
Mateusz Warowny
JAL-3878 Add action and task for annotation services
tree
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commitdiff
2022-04-05
Mateusz Warowny
JAL-3878 Fix method name to fireTaskRestarted
tree
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commitdiff
2022-04-05
Mateusz Warowny
JAL-3878 Make BaseJob setters public so they can be...
tree
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commitdiff
2022-04-05
Mateusz Warowny
JAL-3878 Add fullName to BaseAction class which combine...
tree
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commitdiff
2022-04-05
Mateusz Warowny
JAL-3878 Move status precedence list to JobStatus class
tree
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commitdiff
2022-04-05
Mateusz Warowny
JAL-3878 Add uid to WS Tasks
tree
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commitdiff
2022-03-28
Mateusz Warowny
JAL-3878 Fix discoverer being stuck on BEGIN state...
tree
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commitdiff
2022-03-25
Mateusz Warowny
JAL-3878 Change align frame added to desktop to correct one
tree
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commitdiff
2022-03-25
Mateusz Warowny
JAL-3878 Wrap infoPanel updates with SwingUtilities...
tree
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commitdiff
2022-03-25
Mateusz Warowny
JAL-3878 Fix re-alignment-capable services detection.
tree
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commitdiff
2022-03-25
Mateusz Warowny
JAL-3878 Clear services list on reload.
tree
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commitdiff
2022-03-25
Mateusz Warowny
JAL-3878 Fix task status precedence calculation
tree
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commitdiff
2022-03-25
Mateusz Warowny
JAL-3878 Fix NullPointerExceptions caused by nulls...
tree
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commitdiff
2022-03-25
Mateusz Warowny
JAL3878 Implement slivka service discoverer
tree
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commitdiff
2022-03-25
Mateusz Warowny
JAL-3878 Move action name initialization to its own...
tree
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commitdiff
2022-03-25
Mateusz Warowny
JAL-3878 Create ws2 client for slivka services
tree
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commitdiff
2022-03-24
Mateusz Warowny
JAL-3878 Create service agnostic param datastore and set
tree
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commitdiff
2022-03-23
Mateusz Warowny
JAL-3878 Create beans for un/marshalling service parameters
tree
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commitdiff
2022-03-18
Mateusz Warowny
JAL-3878 Create abstract ws discoverer providing common...
tree
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commitdiff
2022-03-15
Mateusz Warowny
JAL-3878 Connect alignment services with gui
tree
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commitdiff
2022-03-14
Mateusz Warowny
JAL-3878 Move array index search to ArrayUtils
tree
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commitdiff
2022-03-11
Mateusz Warowny
JAL-3878 Create web service menu manager.
tree
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commitdiff
2022-03-09
Mateusz Warowny
JAL-3878 Add WebServiceProviderI - a view of services.
tree
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commitdiff
2022-03-09
Mateusz Warowny
JAL-3878 Improve performance of gap sequence construction.
tree
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commitdiff
2022-03-08
Mateusz Warowny
JAL-3878 Add web service reference to actions.
tree
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commitdiff
2022-03-04
Mateusz Warowny
JAL-3878 Change visibility of WebService methods to...
tree
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commitdiff
2022-03-03
Mateusz Warowny
JAL-3878 Create alignment service "backend" classes
tree
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commitdiff
2022-03-03
Mateusz Warowny
JAL-3878 Remove unused JobStatus methods
tree
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commitdiff
2022-03-03
Mateusz Warowny
JAL-3878 Create abstract base classes for non-interacti...
tree
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commitdiff
2022-03-02
Mateusz Warowny
JAL-3878 Fix typo in method name (getAlignemnt)
tree
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commitdiff
2022-02-28
Mateusz Warowny
JAL-3878 Separate server job handle from task's sub...
tree
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commitdiff
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