2007-02-02 |
amwaterhouse | Must allow for scollbar and frame insets when getting... |
tree | commitdiff |
2007-02-02 |
amwaterhouse | LookandFeel must be set in headless state as window... |
tree | commitdiff |
2007-02-01 |
amwaterhouse | removed deprecated bits |
tree | commitdiff |
2007-02-01 |
amwaterhouse | get fontmetrics from pg |
tree | commitdiff |
2007-02-01 |
amwaterhouse | Dont add null tooltip |
tree | commitdiff |
2007-02-01 |
amwaterhouse | New description |
tree | commitdiff |
2007-02-01 |
amwaterhouse | tooltips |
tree | commitdiff |
2007-02-01 |
amwaterhouse | set description for groups |
tree | commitdiff |
2007-02-01 |
amwaterhouse | Doesnt move with mouse, friendlier for mac users |
tree | commitdiff |
2007-02-01 |
amwaterhouse | Dont repaint tooltip |
tree | commitdiff |
2007-02-01 |
amwaterhouse | One class for edit name/description |
tree | commitdiff |
2007-01-31 |
amwaterhouse | slightly larger window edit name/desc |
tree | commitdiff |
2007-01-31 |
amwaterhouse | edit annotation name/description |
tree | commitdiff |
2007-01-31 |
amwaterhouse | Can edit annotation name/description |
tree | commitdiff |
2007-01-31 |
amwaterhouse | Consensus, conservation, quality labels may have changed |
tree | commitdiff |
2007-01-31 |
amwaterhouse | aligned not used |
tree | commitdiff |
2007-01-31 |
amwaterhouse | Dont export annotations if not visible |
tree | commitdiff |
2007-01-31 |
amwaterhouse | Unique name for new group and treegroup |
tree | commitdiff |
2007-01-31 |
amwaterhouse | Adjust features when cutting and pasting |
tree | commitdiff |
2007-01-31 |
amwaterhouse | make new dataset seq if residues deleted |
tree | commitdiff |
2007-01-31 |
amwaterhouse | copy feature: check for null values |
tree | commitdiff |
2007-01-30 |
amwaterhouse | Check valid residues in ss |
tree | commitdiff |
2007-01-30 |
amwaterhouse | Check seqs in group exist in this alignment |
tree | commitdiff |
2007-01-30 |
amwaterhouse | Any character non aa or nucleotide is a space |
tree | commitdiff |
2007-01-30 |
amwaterhouse | moved painting routine |
tree | commitdiff |
2007-01-30 |
amwaterhouse | consensusColouring never used |
tree | commitdiff |
2007-01-30 |
amwaterhouse | Draw helices correctly |
tree | commitdiff |
2007-01-30 |
amwaterhouse | Use util toHexString |
tree | commitdiff |
2007-01-30 |
amwaterhouse | Output groups in annotation file |
tree | commitdiff |
2007-01-29 |
amwaterhouse | Dont clear graphics g before drawing the image |
tree | commitdiff |
2007-01-29 |
amwaterhouse | Image for labels, stops flickering |
tree | commitdiff |
2007-01-29 |
amwaterhouse | New view copies annotations across |
tree | commitdiff |
2007-01-29 |
amwaterhouse | Tooltips for group names, descriptions |
tree | commitdiff |
2007-01-29 |
amwaterhouse | Description added |
tree | commitdiff |
2007-01-29 |
amwaterhouse | SequenceGroup parsing added to annotation file |
tree | commitdiff |
2007-01-29 |
amwaterhouse | ID_ITALICS option in preferences |
tree | commitdiff |
2007-01-29 |
amwaterhouse | scaleAbove, left and right set when tab selection changes |
tree | commitdiff |
2007-01-29 |
amwaterhouse | Marios annotation bug fixed |
tree | commitdiff |
2007-01-26 |
amwaterhouse | AnnotationId is hashcode of object |
tree | commitdiff |
2007-01-26 |
amwaterhouse | Only set the sequence oncecvs diff datamodel/Alignment... |
tree | commitdiff |
2007-01-26 |
amwaterhouse | Adjusts annotations for sequence edits |
tree | commitdiff |
2007-01-26 |
amwaterhouse | If its null, set tip empty |
tree | commitdiff |
2007-01-25 |
amwaterhouse | Command takes alignment, not gapChar |
tree | commitdiff |
2007-01-25 |
amwaterhouse | Annotations move when full alignment edited |
tree | commitdiff |
2007-01-25 |
amwaterhouse | Annotation adjustment moved to EditCommand |
tree | commitdiff |
2007-01-25 |
amwaterhouse | Remove unneccessary lines |
tree | commitdiff |
2007-01-25 |
amwaterhouse | AlignmentAnnotations require id |
tree | commitdiff |
2007-01-25 |
amwaterhouse | Allow for hidden columns |
tree | commitdiff |
2007-01-25 |
amwaterhouse | Only output visible annotations |
tree | commitdiff |
2007-01-25 |
amwaterhouse | load/get Annotation |
tree | commitdiff |
2007-01-25 |
amwaterhouse | Remove unnecessary line |
tree | commitdiff |
2007-01-25 |
amwaterhouse | Output annotations |
tree | commitdiff |
2007-01-25 |
amwaterhouse | 1.1 enabled |
tree | commitdiff |
2007-01-25 |
jprocter | reinstating class implementation. |
tree | commitdiff |
2007-01-25 |
jprocter | checks for irreflexive mapping in main tester |
tree | commitdiff |
2007-01-24 |
amwaterhouse | Conservation etc have autoCalculated flag set true |
tree | commitdiff |
2007-01-24 |
amwaterhouse | AdjustAnnotations needs position, number and insert |
tree | commitdiff |
2007-01-24 |
amwaterhouse | This constructor is never called |
tree | commitdiff |
2007-01-24 |
amwaterhouse | Features output for javascript |
tree | commitdiff |
2007-01-24 |
amwaterhouse | output now takes alignment, not just sequences |
tree | commitdiff |
2007-01-24 |
amwaterhouse | Extension to fastaFile for myhits |
tree | commitdiff |
2007-01-24 |
jprocter | refactored to use jalview.analysis.Finder for searching... |
tree | commitdiff |
2007-01-24 |
jprocter | kkv change |
tree | commitdiff |
2007-01-24 |
jprocter | Map arbitrary series of non-overlapping integer interva... |
tree | commitdiff |
2007-01-24 |
amwaterhouse | Page setup added |
tree | commitdiff |
2007-01-23 |
amwaterhouse | boolean for internal copies |
tree | commitdiff |
2007-01-23 |
amwaterhouse | Hidden representatives moved from sequence to viewport |
tree | commitdiff |
2007-01-23 |
jprocter | refactoring (added seqIndex/resIndex state for incremen... |
tree | commitdiff |
2007-01-23 |
jprocter | refactored search algorithm from gui classes |
tree | commitdiff |
2007-01-19 |
jprocter | reoganization of PDB sequence fetching for sequence... |
tree | commitdiff |
2007-01-19 |
jprocter | datasetSequence derive method and some checks |
tree | commitdiff |
2007-01-19 |
amwaterhouse | export features/annotations not for import |
tree | commitdiff |
2007-01-19 |
amwaterhouse | Applet can output and load annotations, features |
tree | commitdiff |
2007-01-19 |
amwaterhouse | Neeed to know protocol for annotation loading |
tree | commitdiff |
2007-01-19 |
amwaterhouse | Need to know protocol to load anntotations |
tree | commitdiff |
2007-01-19 |
jprocter | javadoc |
tree | commitdiff |
2007-01-19 |
jprocter | added sequence feature copy constructor. |
tree | commitdiff |
2007-01-18 |
jprocter | random ';' |
tree | commitdiff |
2007-01-18 |
amwaterhouse | Add the last sequence before annotations |
tree | commitdiff |
2007-01-18 |
amwaterhouse | Take scrollOffset into account |
tree | commitdiff |
2007-01-18 |
amwaterhouse | Tool tip for annotation description |
tree | commitdiff |
2007-01-18 |
amwaterhouse | Set description on copy |
tree | commitdiff |
2007-01-18 |
amwaterhouse | Set tooltip |
tree | commitdiff |
2007-01-18 |
amwaterhouse | 1.1 enabled |
tree | commitdiff |
2007-01-18 |
amwaterhouse | put vamsas bit back in |
tree | commitdiff |
2007-01-18 |
amwaterhouse | File Parsing returns Alignments, not Sequence[] |
tree | commitdiff |
2007-01-18 |
amwaterhouse | Is secondary structure label modified |
tree | commitdiff |
2007-01-18 |
amwaterhouse | Display description |
tree | commitdiff |
2007-01-18 |
amwaterhouse | Descriptions can be added to annotations |
tree | commitdiff |
2007-01-17 |
amwaterhouse | Edit name/description added to applet |
tree | commitdiff |
2007-01-17 |
amwaterhouse | Fit to Window bug fixed |
tree | commitdiff |
2007-01-17 |
amwaterhouse | Dont set the font of alignFrameMenubarcvs update applet... |
tree | commitdiff |
2007-01-04 |
amwaterhouse | Send new sequences when firing alignment changed |
tree | commitdiff |
2007-01-04 |
amwaterhouse | Reads in anything following seq id as a description |
tree | commitdiff |
2007-01-04 |
amwaterhouse | HEADER and ATOM must be position 0 |
tree | commitdiff |
2006-12-21 |
jprocter | description from vamsas sequence and file type change |
tree | commitdiff |
2006-12-21 |
amwaterhouse | check on sequence length |
tree | commitdiff |
2006-12-21 |
amwaterhouse | getSequenceAsString |
tree | commitdiff |
2006-12-21 |
amwaterhouse | getSequenceAsString |
tree | commitdiff |
2006-12-21 |
amwaterhouse | remove unnecessary import |
tree | commitdiff |
next |