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Highlight sequences before seleting
[jalview.git]
/
src
/
2006-07-07
amwaterhouse
Highlight sequences before seleting
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commitdiff
2006-07-07
amwaterhouse
Corrected for hidden rows
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commitdiff
2006-07-07
amwaterhouse
Row might have height of zero
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commitdiff
2006-07-07
amwaterhouse
check control down if c pressed in cursor mode
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commitdiff
2006-07-07
amwaterhouse
changeColour is public
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commitdiff
2006-07-07
amwaterhouse
Coms might be null
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commitdiff
2006-07-07
amwaterhouse
New panel layouts
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2006-07-07
amwaterhouse
Offsets
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commitdiff
2006-07-07
amwaterhouse
Optimised PID method
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commitdiff
2006-07-07
amwaterhouse
Make 1.1 compatible
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commitdiff
2006-07-07
amwaterhouse
Move position of stopLoading for 1.5 people
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commitdiff
2006-07-07
amwaterhouse
make 1.1 compatible
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commitdiff
2006-07-07
amwaterhouse
Dont write graph type twice
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commitdiff
2006-07-07
amwaterhouse
Checks on drawing characters and if sequence ref has...
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commitdiff
2006-07-07
amwaterhouse
Colour argument added, to mirror applet view
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commitdiff
2006-07-07
amwaterhouse
Prepare for launchFullApplication
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commitdiff
2006-07-07
amwaterhouse
Highlight sequences to be deleted before deleting,...
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commitdiff
2006-07-07
amwaterhouse
Check row.annotations is not null
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commitdiff
2006-07-07
amwaterhouse
SelectionGroup is initially null
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2006-07-07
amwaterhouse
Replaced by AnnotationFile
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commitdiff
2006-06-23
amwaterhouse
Uniprot may have several accession ids
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commitdiff
2006-06-23
amwaterhouse
Parse HTML links from jalview features file
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commitdiff
2006-06-23
amwaterhouse
DBRefFetcher replaces SequenceFeatureFetcher
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commitdiff
2006-06-23
amwaterhouse
Check if featuresDisplayed is null
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commitdiff
2006-06-23
amwaterhouse
Case wrapped jar file, wrapped preference true dealt...
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commitdiff
2006-06-23
amwaterhouse
No need for repaint
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commitdiff
2006-06-23
amwaterhouse
Uses FeaturesFile parser, GFF and Jalview
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commitdiff
2006-06-23
amwaterhouse
++ --
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commitdiff
2006-06-22
amwaterhouse
Check featureLinks is not null
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commitdiff
2006-06-22
amwaterhouse
ParseFeaturesFile takes protocol as arg
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commitdiff
2006-06-22
amwaterhouse
Takes AlignFrame as arg, to update progressbar
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commitdiff
2006-06-22
amwaterhouse
AlignFrame is now the FeatureListener
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commitdiff
2006-06-22
amwaterhouse
Fetch DBRefs
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commitdiff
2006-06-22
amwaterhouse
Ye olde SequenceFeatureFetcher
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commitdiff
2006-06-22
amwaterhouse
Renamed to DBRefFetcher
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commitdiff
2006-06-22
amwaterhouse
Not used in Jalview
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commitdiff
2006-06-15
amwaterhouse
Use spice-3d das1 source list for nowjalview/gui/DasSou...
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commitdiff
2006-06-15
amwaterhouse
Fixed to trial registry at the moment
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commitdiff
2006-06-15
amwaterhouse
new files
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commitdiff
2006-06-15
amwaterhouse
Not using AxisDasRegistry
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commitdiff
2006-06-15
amwaterhouse
Not needed
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commitdiff
2006-06-15
amwaterhouse
check helperUrl is not null
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commitdiff
2006-06-15
amwaterhouse
Das client files
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commitdiff
2006-06-15
amwaterhouse
Correction - use start and end
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commitdiff
2006-06-15
amwaterhouse
Dont add start and end for the moment
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commitdiff
2006-06-15
amwaterhouse
Wrap alignment moved to alignFrame
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commitdiff
2006-06-15
amwaterhouse
Non positional features shown as mouse over
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commitdiff
2006-06-15
amwaterhouse
fr.findAllFeatures on init
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commitdiff
2006-06-15
amwaterhouse
Correct citation
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commitdiff
2006-06-15
amwaterhouse
Unnecessary import
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commitdiff
2006-06-15
amwaterhouse
FeatureRenderer synchronized featuresAdded method
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commitdiff
2006-06-15
amwaterhouse
Maintain status and position only for uniprot parsing
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commitdiff
2006-06-14
amwaterhouse
Fileloading progressbar
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commitdiff
2006-06-14
amwaterhouse
Status is now in otherData of feature
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commitdiff
2006-06-14
amwaterhouse
Sequence checks for duplicate features
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commitdiff
2006-06-14
amwaterhouse
parseAppletParam
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2006-06-14
amwaterhouse
parseAppletParameter
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commitdiff
2006-06-09
amwaterhouse
Retrieve multiple EMBL ids
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commitdiff
2006-06-09
amwaterhouse
Size adjustments for MacOSX
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commitdiff
2006-06-09
amwaterhouse
Remove unnecessary lines
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commitdiff
2006-06-09
amwaterhouse
createColourFromName if not specified
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commitdiff
2006-06-09
amwaterhouse
Export annotations as Jalview format
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commitdiff
2006-06-09
amwaterhouse
Feature and annotation parsing moved to io
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commitdiff
2006-06-09
amwaterhouse
otherDetails
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commitdiff
2006-06-09
amwaterhouse
Remove getsfarray
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commitdiff
2006-06-09
amwaterhouse
getSequencesArray
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commitdiff
2006-06-09
amwaterhouse
setAcceptAllFileFilter fixes bug on MacOSX
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commitdiff
2006-06-09
amwaterhouse
Export features / annotations
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2006-06-09
amwaterhouse
Save text to file
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2006-06-09
amwaterhouse
createColourFromName
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2006-06-09
amwaterhouse
Function not used
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commitdiff
2006-06-09
amwaterhouse
readAnnotationFile
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2006-06-09
amwaterhouse
parseFeaturesFile
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commitdiff
2006-06-09
amwaterhouse
Annotation/feature exporter
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commitdiff
2006-06-08
jprocter
Introduced DbRefEntry to DasSourceCoordinateSystem...
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commitdiff
2006-06-08
jprocter
DBRefEntry.source enum type
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commitdiff
2006-06-07
amwaterhouse
Wrap alignment added to preferences
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commitdiff
2006-06-07
amwaterhouse
Checks in case DasSource is null
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commitdiff
2006-06-07
amwaterhouse
Remove unnecessary ints
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commitdiff
2006-06-07
amwaterhouse
DAS sources added
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commitdiff
2006-06-07
amwaterhouse
PopupMenu displays URL links
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commitdiff
2006-06-07
amwaterhouse
ignore begin==0 and end==0 for the moment
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commitdiff
2006-06-07
amwaterhouse
Create random colour only if Colour is not specified
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commitdiff
2006-06-07
amwaterhouse
Implements FeatureListener
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commitdiff
2006-06-07
amwaterhouse
new DasSequenceFetcher
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commitdiff
2006-06-07
amwaterhouse
DAS Settings tab added
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commitdiff
2006-06-07
amwaterhouse
Use a label with html instead of textarea
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commitdiff
2006-06-07
amwaterhouse
Remove position, add score and links
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commitdiff
2006-06-07
amwaterhouse
Parameter to show feature settings
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commitdiff
2006-06-07
amwaterhouse
Tooltips for features, links for features added
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commitdiff
2006-06-07
amwaterhouse
NEW FILES
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commitdiff
2006-05-18
jprocter
added future method comment
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commitdiff
2006-05-17
jprocter
added the jnetfile parameter to specify a JNet concise...
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commitdiff
2006-05-17
jprocter
added unofficial support for concise output parsing...
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commitdiff
2006-05-17
jprocter
refactored code for creating JNet annotations
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commitdiff
2006-05-17
jprocter
Refactored code for creating annotation objects from...
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commitdiff
2006-05-17
amwaterhouse
Restrict annotation panel to 50% window on load
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commitdiff
2006-05-16
amwaterhouse
Save annotation colours, hideConsevation etc, graphGroups
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commitdiff
2006-05-16
amwaterhouse
Switch off dashedline after drawing groups
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commitdiff
2006-05-16
amwaterhouse
Remove unwanted line
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