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JAL-1691 linked scrollling in split frame (Desktop)
[jalview.git]
/
src
/
2015-04-07
gmungoc
JAL-1691 linked scrollling in split frame (Desktop)
tree
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commitdiff
2015-04-07
gmungoc
JAL-1691 defensive check for null
tree
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commitdiff
2015-04-02
gmungoc
JAL-1690 'scale protein as cDNA' options in Preferences...
tree
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commitdiff
2015-04-01
gmungoc
JAL-845 fixed start/end range of a mapped SequenceGroup
tree
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commitdiff
2015-04-01
gmungoc
JAL-1264 reinstate Show annotations menu item
tree
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commitdiff
2015-03-30
gmungoc
JAL-1264 remove broken applet build dependencies
tree
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commitdiff
2015-03-30
gmungoc
JAL-1596 refactoring to allow unit tests to start and...
tree
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commitdiff
2015-03-27
tcofoegbu
merge commit
tree
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commitdiff
2015-03-26
tcofoegbu
JAL-1667 updated parseJsonExceptionString method in...
features/JAL-1667_PDBe_Search_API
tree
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commitdiff
2015-03-26
gmungoc
Merge develop to Release_2_8_3_Branch
tree
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commitdiff
2015-03-26
gmungoc
JAL-1688 compiler warnings removed
tree
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commitdiff
2015-03-25
tcofoegbu
JAL-1667 clean up commented codes in PopupMenu.java...
tree
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commitdiff
2015-03-25
tcofoegbu
JAL-1668 Tab for summary config, auto refresh after...
tree
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commitdiff
2015-03-19
tcofoegbu
JAL-1668 finally clean up
tree
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commitdiff
2015-03-18
Charles Ofoegbu
JAL-1668 house keeping
tree
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commitdiff
2015-03-18
Charles Ofoegbu
JAL-1668 added PDBDocFieldPreference for configuring...
tree
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commitdiff
2015-03-16
Charles Ofoegbu
JAL-1668 added validation for manual entry of pdb struc...
tree
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commitdiff
2015-03-15
Charles Ofoegbu
JAL-1667 updated test and internationalization messages
tree
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commitdiff
2015-03-09
Jim Procter
JAL-1565 loading a concise file causes insertions to...
tree
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commitdiff
2015-03-06
Charles Ofoegbu
JAL-1668 added filtering and sorting capabilites
tree
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commitdiff
2015-03-06
Jim Procter
JAL-1683 replace year/version strings with tokens in...
tree
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commitdiff
2015-03-06
Jim Procter
reassign features already created/documented for 2...
tree
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commitdiff
2015-03-06
Jim Procter
Merge commit 'ab43013b7e357b84b4abade0dba949668dfb2a0e...
tree
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commitdiff
2015-03-06
Charles Ofoegbu
JAL-1667 refactoring to support JAL-1668
tree
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commitdiff
2015-03-04
Charles Ofoegbu
JAL-1668 First version JAL-1668
tree
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commitdiff
2015-03-02
Charles Ofoegbu
house keeping
tree
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commitdiff
2015-02-27
Jim Procter
JAL-1678 - patch to make sure we only compare positions...
tree
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commitdiff
2015-02-27
Jim Procter
fix for JAL-1678
tree
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commitdiff
2015-02-26
Charles Ofoegbu
JAL-1667 PDBe Search Interface implementation
tree
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commitdiff
2015-02-19
gmungoc
JAL-1665 refactored Sequence.getSequenceFeatures
features/sequenceFeatureRefactor
tree
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commitdiff
2015-02-12
Jim Procter
JAL-1350 pass the columnselection rather then selected...
tree
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commitdiff
2015-02-12
Jim Procter
JAL-1350 cloned method and tested equivalence for using...
tree
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commitdiff
2015-02-12
Jim Procter
JAL-1115 switch to lists in SequenceGroup
tree
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commitdiff
2015-02-12
Jim Procter
JAL-1115 typecast
tree
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commitdiff
2015-02-12
Jim Procter
javadoc
tree
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commitdiff
2015-02-12
Jim Procter
JAL-1115 List rather than vector for sequence groups...
tree
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commitdiff
2015-02-05
Charles Ofoegbu
merge commit
tree
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commitdiff
2015-02-04
Charles Ofoegbu
JAL-1643 modified jalviewFileChooser to retain default...
tree
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commitdiff
2015-02-04
Charles Ofoegbu
JAL-1643 Modified JalviewFileChooser to have a more...
tree
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commitdiff
2015-02-02
Charles Ofoegbu
Merge branch 'bug/JAL-1644_Finder-logic-improvement...
tree
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commitdiff
2015-02-02
Charles Ofoegbu
JAL-1644 added null check for sequence description...
tree
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commitdiff
2015-02-02
Charles Ofoegbu
Merge commit
tree
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commitdiff
2015-02-02
Charles Ofoegbu
JAL-1644 revised Finder's implementation to use a flag...
tree
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commitdiff
2015-02-02
Charles Ofoegbu
Merge branch 'bug/JAL-1644_Finder-logic-improvement...
tree
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commitdiff
2015-02-02
Charles Ofoegbu
JAL-1644 improvment of finder logic to include the...
tree
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commitdiff
2015-01-28
Jim Procter
JAL-1565 automatically mark query sequence as the seque...
tree
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commitdiff
2015-01-28
Jim Procter
JAL-674 patch to make Mapping.compareTransferredToR...
tree
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commitdiff
2015-01-27
gmungoc
JAL-1588 new class renamed
tree
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commitdiff
2015-01-26
gmungoc
Merge branch 'features/JAL-1588saveChimeraSession'...
tree
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commitdiff
2015-01-26
gmungoc
JAL-1588 restoring saved Chimera session(s)
tree
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commitdiff
2015-01-23
Charles Ofoegbu
Merge branch 'features/JAL-1553_improvement-select...
tree
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commitdiff
2015-01-23
gmungoc
JAL-1588 first working (?) restore of Chimera session...
tree
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commitdiff
2015-01-23
Charles Ofoegbu
JAL-1553 added help documentation and updated Annotatio...
features/JAL-1553_improvement-select-column-by-annotation-row-query-interface
tree
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commitdiff
2015-01-23
Jim Procter
JAL-1551 formatting
tree
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commitdiff
2015-01-23
Jim Procter
JAL-1286 don't print an exception if a non-gzip stream...
tree
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commitdiff
2015-01-23
Jim Procter
JAL-1551 crlf changes
tree
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commitdiff
2015-01-23
Jim Procter
JAL-969 hasHiddenRows is now an interface method
tree
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commitdiff
2015-01-23
Jim Procter
JAL-969 drop the hiddenColumns flag in favour of checki...
tree
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commitdiff
2015-01-23
Jim Procter
Merge branch 'develop' into feature_29/JAL-1372_referen...
tree
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commitdiff
2015-01-23
Jim Procter
JAL-1628 tweak signature of core annotation printer...
tree
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commitdiff
2015-01-23
Jim Procter
JAL-1551 formatting/imports
tree
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commitdiff
2015-01-23
Jim Procter
JAL-1551 JAL-962 formatting and code change ripples...
tree
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commitdiff
2015-01-23
Charles Ofoegbu
Merge branch 'features/JAL-1553_improvement-select...
tree
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commitdiff
2015-01-23
Charles Ofoegbu
JAL-1553 fixed null pointer exception thrown in SeqCanv...
tree
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commitdiff
2015-01-23
Jim Procter
JAL-1551 source code formatting
tree
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commitdiff
2015-01-23
Jim Procter
JAL-969 javadoc and mark interface overrides for clarity
tree
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commitdiff
2015-01-23
Jim Procter
JAL-1628 drop getShowAnnotation accessor in favour...
tree
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commitdiff
2015-01-22
Charles Ofoegbu
Merge branch 'features/JAL-1553_improvement-select...
tree
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commitdiff
2015-01-22
Charles Ofoegbu
JAL-1553 added applet support for the select-column...
tree
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commitdiff
2015-01-21
Jim Procter
Merge branch 'develop' into feature_29/JAL-1372_referen...
tree
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commitdiff
2015-01-20
Charles Ofoegbu
clean up
tree
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commitdiff
2015-01-20
Charles Ofoegbu
clean up
tree
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commitdiff
2015-01-20
Charles Ofoegbu
Merge branch 'features/JAL-1553_improvement-select...
tree
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commitdiff
2015-01-20
Charles Ofoegbu
Further abstractions and clean up
tree
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commitdiff
2015-01-20
Charles Ofoegbu
Merge branch 'features/JAL-1553_improvement-select...
tree
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commitdiff
2015-01-20
Charles Ofoegbu
basic house keeping
tree
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commitdiff
2015-01-20
Charles Ofoegbu
Merge branch 'features/JAL-1553_improvement-select...
tree
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commitdiff
2015-01-20
Charles Ofoegbu
JAL-1553 enhancement of column selection by annotation...
tree
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commitdiff
2015-01-18
Jim Procter
JAL-1372 i18n and tweaking set/unset representative...
tree
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commitdiff
2015-01-18
Jim Procter
JAL-1628 formatting
tree
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commitdiff
2015-01-18
Jim Procter
JAL-1628 employ new AnnotationFile reader method to...
tree
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commitdiff
2015-01-18
Jim Procter
JAL-1628 new entry point for reading annotation files...
tree
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commitdiff
2015-01-18
Jim Procter
JAL-1628 formatting and javadoc
tree
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commitdiff
2015-01-18
Jim Procter
JAL-1628 method to hide insertions to current sequence...
tree
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commitdiff
2015-01-18
Jim Procter
JAL-1628 wrappers for common checks on ColumnSelection
tree
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commitdiff
2015-01-18
Jim Procter
JAL-1628 ColumnSelection method to hide insertions...
tree
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commitdiff
2015-01-18
Jim Procter
JAL-1628 new method to get a list of insertions in...
tree
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commitdiff
2015-01-18
Jim Procter
JAL-1372 JAL-1114 JAL-1628 tidy sequenceI/sequence
tree
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commitdiff
2015-01-14
gmungoc
JAL-1629 .jar option removed from Alignment File Save...
tree
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commitdiff
2015-01-14
Charles Ofoegbu
Merge branch 'features/JAL-1553_select-columns-by-annot...
tree
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commitdiff
2015-01-14
Charles Ofoegbu
Modified AnnotationColumnChooser to maintain state...
features/JAL-1553_select-columns-by-annotation
tree
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commitdiff
2015-01-13
Charles Ofoegbu
Merge branch 'features/JAL-1553_select-columns-by-annot...
tree
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commitdiff
2015-01-13
Charles Ofoegbu
Refactored AnnotationColumnChoser and AnnotationColorCh...
tree
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commitdiff
2015-01-10
Charles Ofoegbu
JAL-1553 merge commit
tree
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commitdiff
2015-01-10
Charles Ofoegbu
JAL-1553 implementation of column selection by annotati...
tree
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commitdiff
2015-01-09
Jim Procter
Merge branch 'JAL-1372_referenceseq' into feature_29...
tree
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commitdiff
2015-01-09
Jim Procter
JAL-1483 formatting
tree
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commitdiff
2015-01-09
Jim Procter
JAL-1483 remember to look at base dataset sequence...
tree
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commitdiff
2015-01-09
gmungoc
JAL-1588 check Chimera session file still exists
tree
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commitdiff
2015-01-08
gmungoc
JAL-1588 part work save/restore of Chimera session
tree
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commitdiff
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