2020-10-28 |
Jim Procter | JAL-3760 fix tests for changed behaviour |
tree | commitdiff |
2020-10-28 |
Jim Procter | Merge branch 'bug/JAL-3760_protsTreatedAsNucleotides... |
tree | commitdiff |
2020-10-28 |
Jim Procter | JAL-3765 fix test |
tree | commitdiff |
2020-10-27 |
Jim Procter | JAL-3768 noticed failure of test when run as part of... |
tree | commitdiff |
2020-10-22 |
gmungoc | JAL-3763 Javadoc, check for null, additional tests |
tree | commitdiff |
2020-10-22 |
gmungoc | JAL-3751 only merge strictly contiguous ranges of mappings |
tree | commitdiff |
2020-10-22 |
gmungoc | JAL-3763 test coverage for AlignedCodonFrame.markMapped... |
tree | commitdiff |
2020-10-22 |
gmungoc | JAL-3700 JAL-3763 create datasets for test sequences |
tree | commitdiff |
2020-10-22 |
gmungoc | JAL-3700 additions and corrections to unit tests |
tree | commitdiff |
2020-10-22 |
gmungoc | JAL-3763 Javadoc, check for null, additional tests task/JAL-3763_newDatasetForCds |
tree | commitdiff |
2020-10-22 |
gmungoc | JAL-3751 only merge strictly contiguous ranges of mappings |
tree | commitdiff |
2020-10-22 |
gmungoc | JAL-3763 test coverage for AlignedCodonFrame.markMapped... |
tree | commitdiff |
2020-10-20 |
Jim Procter | JAL-3765 fix test bug/JAL-3765_Find_bugs_in_21112 |
tree | commitdiff |
2020-10-19 |
Jim Procter | JAL-3765 simple test that findAll finds all matches... |
tree | commitdiff |
2020-10-08 |
gmungoc | JAL-3700 JAL-3763 create datasets for test sequences |
tree | commitdiff |
2020-09-29 |
Jim Procter | JAL-3760 fix tests for changed behaviour bug/JAL-3760_protsTreatedAsNucleotides |
tree | commitdiff |
2020-09-23 |
Ben Soares | Merge branch 'develop' into bug/JAL-3753_resources_dupl... |
tree | commitdiff |
2020-09-23 |
Jim Procter | JAL-3748 maximal test for JAL-3748 using covid19 CDS... |
tree | commitdiff |
2020-09-23 |
Ben Soares | JAL-3477 Added 10k leeway to amount of memory reserved... |
tree | commitdiff |
2020-09-23 |
Jim Procter | JAL-3748 more tests verifying reconstruction of Alignem... |
tree | commitdiff |
2020-09-23 |
Jim Procter | JAL-3748 reusable assert to trace specific issues with... |
tree | commitdiff |
2020-09-22 |
Jim Procter | JAL-3748 simple test for SeqCigar preservation of start... |
tree | commitdiff |
2020-09-22 |
Jim Procter | JAL-3748 additional asserts to verify start/end after... |
tree | commitdiff |
2020-09-21 |
Jim Procter | Merge branch 'merge_review/JAL-3490_2_11_2_develop... |
tree | commitdiff |
2020-09-17 |
gmungoc | JAL-3700 additions and corrections to unit tests bug/JAL-3700_mapSequenceSelection |
tree | commitdiff |
2020-09-16 |
Jim Procter | JAL-3748 store an AlignmentView for the complement... |
tree | commitdiff |
2020-09-14 |
Ben Soares | Merge branch 'feature/JAL-3615gzipXfam' into develop |
tree | commitdiff |
2020-09-02 |
Ben Soares | JAL-3280 Test for remote release build_properties file... |
tree | commitdiff |
2020-08-27 |
Ben Soares | Merge branch 'releases/Release_2_11_1_Branch' into... merge/JAL_1842+JAL-3509+releases_Release_2_11_1_Branch |
tree | commitdiff |
2020-08-21 |
Jim Procter | JAL-3675 2.11.1.1 java 8 compatible patch for JAL-3615... |
tree | commitdiff |
2020-08-21 |
Jim Procter | JAL-3615 code tidy, improve unit test |
tree | commitdiff |
2020-08-18 |
gmungoc | JAL-2656 Java 8 compatible test for gzipped, refactored... |
tree | commitdiff |
2020-08-18 |
gmungoc | JAL-3692 parse multiline CDS location correctly |
tree | commitdiff |
2020-08-17 |
Jim Procter | Merge branch 'patch/JAL-3561_JAL-3660_fileformatexport_... |
tree | commitdiff |
2020-08-17 |
Jim Procter | JAL-3490 merged with 2.11.2 develop |
tree | commitdiff |
2020-08-17 |
Jim Procter | Merge branch 'patch/Release_2_11_1_Branch_patch_JAL... |
tree | commitdiff |
2020-08-17 |
Jim Procter | Merge branch 'task/JAL-3597memoryLeakTest' into develop |
tree | commitdiff |
2020-08-13 |
Ben Soares | JAL-3597 Increased heap passmark to <= 45MB and report... |
tree | commitdiff |
2020-08-13 |
gmungoc | JAL-3597 slight tidying of code and Javadoc, passmark... |
tree | commitdiff |
2020-08-13 |
gmungoc | JAL-3597 additional references nulled, bug in test... |
tree | commitdiff |
2020-08-13 |
Ben Soares | JAL-3597 Increased heap passmark to <= 45MB and report... |
tree | commitdiff |
2020-08-10 |
gmungoc | JAL-3490 match count independent of contiguous matches... patch/Release_2_11_1_Branch_patch_JAL-3490 |
tree | commitdiff |
2020-08-05 |
Jim Procter | JAL-3628 init log after loading testProps for each... |
tree | commitdiff |
2020-08-05 |
gmungoc | JAL-3692 unit test updated for ?gzip download endpoint URL patch/JAL-3692enaEndpointFlatfile |
tree | commitdiff |
2020-08-05 |
gmungoc | JAL-3692 parse multiline feature qualifiers and escaped... |
tree | commitdiff |
2020-08-05 |
gmungoc | JAL-3692 unit test updated for ?gzip download endpoint URL feature/JAL-3692enaEndpoint |
tree | commitdiff |
2020-08-05 |
gmungoc | JAL-3692 parse multiline feature qualifiers and escaped... |
tree | commitdiff |
2020-08-03 |
Jim Procter | JAL-3692 fix up test for 2.11.1 series datamodel API |
tree | commitdiff |
2020-08-03 |
gmungoc | JAL-3692 set CDS /product as EMBLCDSPROTEIN description |
tree | commitdiff |
2020-08-03 |
gmungoc | JAL-3692 refactor/complete parsing, more unit test... |
tree | commitdiff |
2020-08-03 |
gmungoc | JAL-3692 parse DE for description, and other refactoring... |
tree | commitdiff |
2020-08-03 |
gmungoc | JAL-3692 URL tests updated |
tree | commitdiff |
2020-08-03 |
gmungoc | JAL-3692 unit test (J03321), fixes, dbrefs; todo: prote... |
tree | commitdiff |
2020-08-03 |
gmungoc | JAL-3692 EMBL flatfile fetcher / parser (todo: CDS... |
tree | commitdiff |
2020-07-31 |
Ben Soares | Merge branch 'releases/Release_2_11_1_Branch' into... |
tree | commitdiff |
2020-07-28 |
Jim Procter | JAL-3615 update tests for Rfam/Pfam specific gzip endpoints |
tree | commitdiff |
2020-07-28 |
Jim Procter | JAL-3615 update tests for Rfam/Pfam specific gzip endpoints |
tree | commitdiff |
2020-07-27 |
gmungoc | JAL-2656 JAL-3615 check response headers to test for... |
tree | commitdiff |
2020-07-27 |
gmungoc | JAL-3615 used gzip endpoints for Pfam and Rfam |
tree | commitdiff |
2020-07-27 |
gmungoc | JAL-3692 set CDS /product as EMBLCDSPROTEIN description |
tree | commitdiff |
2020-07-27 |
gmungoc | JAL-3692 refactor/complete parsing, more unit test... |
tree | commitdiff |
2020-07-27 |
gmungoc | JAL-3621 corrected sequence feature sort and test |
tree | commitdiff |
2020-07-24 |
gmungoc | JAL-3692 parse DE for description, and other refactoring... |
tree | commitdiff |
2020-07-23 |
gmungoc | JAL-3692 URL tests updated |
tree | commitdiff |
2020-07-22 |
gmungoc | JAL-3692 unit test (J03321), fixes, dbrefs; todo: prote... |
tree | commitdiff |
2020-07-21 |
gmungoc | JAL-3692 EMBL flatfile fetcher / parser (todo: CDS... |
tree | commitdiff |
2020-07-20 |
gmungoc | JAL-3597 slight tidying of code and Javadoc, passmark... |
tree | commitdiff |
2020-07-14 |
gmungoc | JAL-3597 additional references nulled, bug in test... |
tree | commitdiff |
2020-07-02 |
gmungoc | JAL-2656 JAL-3615 check response headers to test for... |
tree | commitdiff |
2020-07-02 |
gmungoc | JAL-3615 used gzip endpoints for Pfam and Rfam |
tree | commitdiff |
2020-06-29 |
Jim Procter | JAL-3493 failing test - creates a highlight and column... |
tree | commitdiff |
2020-06-29 |
Jim Procter | JAL-3493 failing test - creates a highlight and column... |
tree | commitdiff |
2020-06-29 |
Jim Procter | Merge branch 'bug/JAL-3490findSpanHiddenGaps' into... |
tree | commitdiff |
2020-06-25 |
gmungoc | JAL-3518 pull up [get|list]ResidueAttributes to Structu... |
tree | commitdiff |
2020-06-23 |
gmungoc | JAL-3518 separation of ChimeraXManager, pull up of... |
tree | commitdiff |
2020-06-16 |
Jim Procter | Merge branch 'bug/JAL-3561_translatefileformats' into... patch/JAL-3561_JAL-3660_fileformatexport_CLI |
tree | commitdiff |
2020-06-16 |
Jim Procter | JAL-3561 JAL-3660 check resolved FileFormatI instances... |
tree | commitdiff |
2020-06-01 |
gmungoc | JAL-3518 test result corrected |
tree | commitdiff |
2020-06-01 |
gmungoc | JAL-3518 add alwaysRun = true [sigh] |
tree | commitdiff |
2020-06-01 |
gmungoc | JAL-3518 more test coverage for structure commands |
tree | commitdiff |
2020-05-29 |
gmungoc | JAL-2422 test updated |
tree | commitdiff |
2020-05-29 |
gmungoc | Merge branch 'feature/JAL-3551Pymol' into develop |
tree | commitdiff |
2020-05-26 |
gmungoc | JAL-1889 disable test failing on build server |
tree | commitdiff |
2020-05-21 |
gmungoc | JAL-3551 copy Jalview features to Pymol 'p' (with pull... |
tree | commitdiff |
2020-05-19 |
gmungoc | JAL-3621 corrected sequence feature sort and test |
tree | commitdiff |
2020-05-19 |
gmungoc | JAL-3621 corrected sequence feature sort and test |
tree | commitdiff |
2020-05-19 |
gmungoc | Merge branch 'develop' into feature/JAL-3551Pymol |
tree | commitdiff |
2020-05-18 |
gmungoc | JAL-3529 test updated for revised signature of getDBRefs() |
tree | commitdiff |
2020-05-18 |
gmungoc | Merge branch 'Jalview-JS/develop' into develop |
tree | commitdiff |
2020-05-15 |
gmungoc | JAL-2422 JAL-3551 unit tests updated for code changes |
tree | commitdiff |
2020-05-15 |
gmungoc | JAL-3551 pull up Close Viewer dialog to base class |
tree | commitdiff |
2020-05-11 |
gmungoc | JAL-2422 JAL-3551 viewer text/variables generalised... |
tree | commitdiff |
2020-05-01 |
gmungoc | JAL-3613 check sequence overlap when matching search... |
tree | commitdiff |
2020-04-25 |
gmungoc | Merge branch 'develop' into feature/JAL-3551Pymol |
tree | commitdiff |
2020-04-21 |
Jim Procter | Merge branch 'bug/JAL-3574filterByPOS' into documentati... |
tree | commitdiff |
2020-04-21 |
gmungoc | JAL-3210 try adding setup method to unit test failing... |
tree | commitdiff |
2020-04-21 |
gmungoc | JAL-1889 corrected wait for consensus to be calculated |
tree | commitdiff |
2020-04-21 |
Jim Procter | Merge branch 'bug/JAL-3567virtualFeatureCoordinates... |
tree | commitdiff |
2020-04-21 |
Jim Procter | JAL-3567 translated rather than imputed peptide |
tree | commitdiff |
2020-04-17 |
gmungoc | JAL-3567 unit tests for linked feature tooltips |
tree | commitdiff |
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