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Merge branch 'develop' into features/JAL-1793VCF; lambda Function for
[jalview.git]
/
test
/
jalview
/
2017-05-24
gmungoc
JAL-2529 add object_type=cdna to EnsemblCdna parameters
tree
|
commitdiff
2017-05-24
gmungoc
Merge branch 'bug/JAL-2541cutWithFeatures' into feature...
tree
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commitdiff
2017-05-24
gmungoc
JAL-2505 JAL-2542 SequenceFeatures.shift() to shift...
tree
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commitdiff
2017-05-24
kiramt
JAL-2034 Added isDefined flag to SequenceGroup
tree
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commitdiff
2017-05-23
Jim Procter
JAL-2549 RNAAliFold result to annotation file roundtrip...
features/JAL-2549_updateJABAWSto220
tree
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commitdiff
2017-05-23
Jim Procter
JAL-2549 skip ‘Unrecognised Service’ which resolves...
tree
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commitdiff
2017-05-23
Jim Procter
JAL-2549 replace JABAWS 2.1 with 2.2 client and remove...
tree
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commitdiff
2017-05-23
gmungoc
JAL-2490 find features for export as GFF, JAL-2548...
tree
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commitdiff
2017-05-23
gmungoc
JAL-2490 test coverage for printGffFormat before refact...
tree
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commitdiff
2017-05-23
gmungoc
JAL-2490 unit tests for getFeaturesForGroup
tree
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commitdiff
2017-05-23
gmungoc
JAL-2490 tidy code and tests for feature export in...
tree
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commitdiff
2017-05-22
gmungoc
Merge branch 'develop' into features/JAL-2446NCList
tree
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commitdiff
2017-05-22
gmungoc
JAL-2544 unit tests for sort by feature score
tree
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commitdiff
2017-05-22
gmungoc
JAL-2546 JAL-2490 efficient lookup of features, correct...
tree
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commitdiff
2017-05-22
gmungoc
JAL-2490 add non-positional feature case to test prior...
tree
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commitdiff
2017-05-22
gmungoc
JAL-2480 always include all non-positional features...
tree
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commitdiff
2017-05-19
gmungoc
JAL-2490 performant lookup of features for sorting
tree
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commitdiff
2017-05-19
gmungoc
JAL-2505 unit test for sort by feature density, Javadoc
tree
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commitdiff
2017-05-18
gmungoc
JAL-2541 initial unit tests for edit cut relocate features
tree
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commitdiff
2017-05-18
gmungoc
JAL-2541 fix to initSeqFrom (and minor code tidy);...
tree
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commitdiff
2017-05-18
kiramt
JAL-2256 Corrected AllCols/Rows iterator behaviour...
bug/JAL-2256
tree
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commitdiff
2017-05-16
gmungoc
JAL-2505 set helix number as feature group in SequenceF...
tree
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commitdiff
2017-05-16
gmungoc
Merge branch 'develop' into features/JAL-2446NCList
tree
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commitdiff
2017-05-16
gmungoc
JAL-2505 additional tests/asserts prior to refactoring
tree
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commitdiff
2017-05-16
kiramt
Merge branch 'develop' into bug/JAL-2491
tree
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commitdiff
2017-05-16
kiramt
JAL-2491 Better merge
tree
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commitdiff
2017-05-16
Jim Procter
Merge branch 'bug/JAL-2507_rnasecstrstockholm' into...
tree
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commitdiff
2017-05-15
Jim Procter
JAL-2507 fix test: knockon from capitalisation on secon...
bug/JAL-2507_rnasecstrstockholm
tree
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commitdiff
2017-05-15
Jim Procter
Merge branch 'bug/JAL-2507_rnasecstrstockholm' into...
tree
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commitdiff
2017-05-15
Jim Procter
JAL-2311 disable and relocate Jared service tests to...
tree
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commitdiff
2017-05-15
Jim Procter
JAL-2507 - required callers to specify exact ignore...
tree
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commitdiff
2017-05-15
gmungoc
Merge branch 'develop' into features/JAL-2446NCList
tree
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commitdiff
2017-05-15
kiramt
Merge remote-tracking branch 'origin/develop' into...
tree
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commitdiff
2017-05-15
kiramt
JAL-2491 Tests
tree
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commitdiff
2017-05-12
kiramt
JAL-2491 Tidies to Overview panel calls in light of...
tree
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commitdiff
2017-05-12
gmungoc
JAL-2525 get sequence features for Ontology term(s...
tree
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commitdiff
2017-05-12
gmungoc
JAL-2480 more efficient contains check on add; tidied...
tree
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commitdiff
2017-05-12
Jim Procter
Merge branch 'features/JAL-2388OverviewWindow' into...
tree
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commitdiff
2017-05-12
kiramt
JAL-2491 Unit test updates
tree
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commitdiff
2017-05-11
Jim Procter
JAL-2507 JAL-2509 allow whitespace==null for annotation...
tree
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commitdiff
2017-05-11
kiramt
JAL-2491 Unit tests and updates
tree
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commitdiff
2017-05-09
Jim Procter
JAL-2507 spit out tests for ‘{‘ WUSS io from ‘[‘ WUSS...
tree
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commitdiff
2017-05-09
Jim Procter
JAL-2509 verify stockholm parser’s bracket regex is...
tree
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commitdiff
2017-05-09
Jim Procter
JAL-2507 JAL-2509 extend test to cover round trip of...
tree
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commitdiff
2017-05-09
tcofoegbu
JAL-2520 unit test for improvement to download structur...
tree
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commitdiff
2017-05-09
Jim Procter
JAL-2507 simplify round trip test via AppletFormatAdapter
tree
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commitdiff
2017-05-09
Jim Procter
JAL-2507 test for alignment+rna annotation -> Stockholm...
tree
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commitdiff
2017-05-09
gmungoc
JAL-2403 use preferred factory method to create score...
tree
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commitdiff
2017-05-09
gmungoc
JAL-2480 include sequenceFeatureStore in createDatasetS...
tree
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commitdiff
2017-05-09
gmungoc
JAL-2483 JAL-2481 fixed findAllFeatures to handle null...
tree
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commitdiff
2017-05-08
gmungoc
Merge branch 'develop' into features/JAL-2446NCList
tree
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commitdiff
2017-05-08
tcofoegbu
Merge branch 'develop' of https://source.jalview.org...
tree
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commitdiff
2017-05-08
kiramt
JAL-2512 And corresponding test
bug/JAL-2512
tree
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commitdiff
2017-05-05
kiramt
Merge remote-tracking branch
tree
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commitdiff
2017-05-05
kiramt
Merge remote-tracking branch 'origin/develop' into
features/JAL-2388hiddencolumnschanges
tree
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commitdiff
2017-05-05
kiramt
Merge remote-tracking branch 'origin/develop' into
tree
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commitdiff
2017-05-04
tcofoegbu
JAL-1648 resolved CR-JAL-41 review issues
tree
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commitdiff
2017-05-04
Jim Procter
Merge branch 'features/JAL-2503_filteronquantitativeann...
tree
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commitdiff
2017-05-04
Jim Procter
Merge branch 'features/JAL-2393customMatrices' into...
tree
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commitdiff
2017-05-04
Jim Procter
JAL-1656 make RNAML->Stockholm round trip test pass...
tree
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commitdiff
2017-05-04
Jim Procter
JAL-2507 JAL-2509 allow differences in visibility of...
tree
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commitdiff
2017-05-04
Jim Procter
JAL-2507 JAL-2509 new assert to compare secondary struc...
tree
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commitdiff
2017-05-04
Jim Procter
Merge branch 'features/JAL-2503_filteronquantitativeann...
tree
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commitdiff
2017-05-04
Jim Procter
Merge branch 'features/JAL-2393customMatrices' into...
tree
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commitdiff
2017-05-03
Jim Procter
JAL-2503 AlignmentAnnotation.isQuantitative() test
tree
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commitdiff
2017-05-03
gmungoc
Merge branch 'develop' into features/JAL-2446NCList
tree
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commitdiff
2017-05-03
gmungoc
JAL-2246 basic sanity test of fetching example accessions
tree
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commitdiff
2017-05-03
gmungoc
Merge branch 'develop' into features/JAL-2446NCList
tree
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commitdiff
2017-05-03
gmungoc
JAL-2246 test a Uniprot fetch
tree
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commitdiff
2017-05-03
gmungoc
JAL-2485 JAL-2246 test Uniprot FTS summary
tree
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commitdiff
2017-05-02
Jim Procter
JAL-2424 fixme’s removed
tree
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commitdiff
2017-05-02
Jim Procter
JAL-2424 update assert to correct width for normalising...
tree
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commitdiff
2017-05-02
Jim Procter
JAL-2424 resolved, assert updated to pass (1f != 1d)
tree
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commitdiff
2017-05-02
Jim Procter
Merge branch 'develop' into features/JAL-2393customMatrices
tree
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commitdiff
2017-05-02
Jim Procter
Merge branch 'bug/JAL-2424getVisibleContigs' into develop
tree
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commitdiff
2017-05-02
gmungoc
JAL-2499 JAL-2403 push 'configure for view' inside...
tree
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commitdiff
2017-05-02
gmungoc
Merge branch 'develop' into features/JAL-2393customMatrices
tree
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commitdiff
2017-05-01
tcofoegbu
Merge branch 'develop' of https://source.jalview.org...
tree
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commitdiff
2017-05-01
tcofoegbu
Merge branch 'develop' of https://source.jalview.org...
tree
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commitdiff
2017-05-01
tcofoegbu
JAL-2482 unit test for bug fix
tree
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commitdiff
2017-05-01
gmungoc
Merge branch 'develop' into features/JAL-2446NCList
tree
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commitdiff
2017-05-01
gmungoc
JAL-2489 JAL-2371 reinstate calls to
tree
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commitdiff
2017-05-01
tcofoegbu
JAL-2465 bugfix and rerefactor renamed getPdbFile(...
tree
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commitdiff
2017-05-01
tcofoegbu
JAL-2465 unit test for bugfix
tree
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commitdiff
2017-05-01
gmungoc
Merge remote-tracking branch
tree
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commitdiff
2017-04-28
gmungoc
Merge branch 'develop' into features/JAL-2446NCList
tree
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commitdiff
2017-04-28
gmungoc
Merge branch 'develop' into features/JAL-2393customMatrices
tree
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commitdiff
2017-04-27
Jim Procter
JAL-1933 patch jalview/io/testProps.jvprops to show...
features/JAL-1933_occupancy
tree
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commitdiff
2017-04-27
Jim Procter
JAL-1933 patch jalview/io/testProps.jvprops to show...
tree
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commitdiff
2017-04-27
Jim Procter
JAL-1933 don't show occupancy row when testing conserva...
tree
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commitdiff
2017-04-27
Jim Procter
JAL-1933 test for SHOW_OCCUPANCY .jalview_properties...
tree
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commitdiff
2017-04-27
Jim Procter
JAL-2494 test to cover AnnotatedCollectionI.findAnnotat...
tree
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commitdiff
2017-04-27
gmungoc
JAL-2492 use SequenceFeatures.getNonPositionalFeatures()
tree
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commitdiff
2017-04-27
gmungoc
JAL-2480 don't allow null type in SequenceFeature
tree
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commitdiff
2017-04-26
kiramt
Merge remote-tracking branch 'origin/features/JAL-2388h...
tree
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commitdiff
2017-04-26
kiramt
JAL-2388 Update to hidden columns/column selection...
tree
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commitdiff
2017-04-26
kiramt
Merge remote-tracking branch 'origin/develop' into...
tree
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commitdiff
2017-04-26
kiramt
Merge remote-tracking branch 'origin/develop' into...
tree
|
commitdiff
2017-04-26
kiramt
Merge remote-tracking branch 'origin/features/JAL-2388h...
tree
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commitdiff
2017-04-26
kiramt
JAL-2388 last separation of hidden columns/col selection
tree
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commitdiff
next