source.jalview.org Git - jabaws.git/log

pvtroshin [Tue, 21 Dec 2010 18:28:57 +0000 (18:28 +0000)]

Write javadoc for new datamodel classes , remove some incomplete staff

git-svn-id: link to svn.lifesci.dundee.ac.uk/svn/barton/ptroshin/JABA2@3555 e3abac25-378b-4346-85de-24260fe3988d

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pvtroshin [Tue, 21 Dec 2010 18:13:36 +0000 (18:13 +0000)]

remove javadoc to update

git-svn-id: link to svn.lifesci.dundee.ac.uk/svn/barton/ptroshin/JABA2@3554 e3abac25-378b-4346-85de-24260fe3988d

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pvtroshin [Tue, 21 Dec 2010 15:02:12 +0000 (15:02 +0000)]

AAConWS further work

git-svn-id: link to svn.lifesci.dundee.ac.uk/svn/barton/ptroshin/JABA2@3550 e3abac25-378b-4346-85de-24260fe3988d

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pvtroshin [Mon, 20 Dec 2010 13:56:37 +0000 (13:56 +0000)]

Further work on AAConWS

git-svn-id: link to svn.lifesci.dundee.ac.uk/svn/barton/ptroshin/JABA2@3534 e3abac25-378b-4346-85de-24260fe3988d

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pvtroshin [Thu, 16 Dec 2010 11:30:06 +0000 (11:30 +0000)]

Gramma improved

git-svn-id: link to svn.lifesci.dundee.ac.uk/svn/barton/ptroshin/JABA2@3501 e3abac25-378b-4346-85de-24260fe3988d

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pvtroshin [Thu, 9 Dec 2010 12:02:15 +0000 (12:02 +0000)]

More javadocs

git-svn-id: link to svn.lifesci.dundee.ac.uk/svn/barton/ptroshin/JABA2@3458 e3abac25-378b-4346-85de-24260fe3988d

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pvtroshin [Thu, 9 Dec 2010 11:42:55 +0000 (11:42 +0000)]

remove old javadoc to replace with new

git-svn-id: link to svn.lifesci.dundee.ac.uk/svn/barton/ptroshin/JABA2@3457 e3abac25-378b-4346-85de-24260fe3988d

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pvtroshin [Fri, 3 Dec 2010 19:03:59 +0000 (19:03 +0000)]

Refactored client class to accomodate new WS interface and reduce the complexity

git-svn-id: link to svn.lifesci.dundee.ac.uk/svn/barton/ptroshin/JABA2@3428 e3abac25-378b-4346-85de-24260fe3988d

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pvtroshin [Fri, 3 Dec 2010 16:19:10 +0000 (16:19 +0000)]

Preset limits for AACon

git-svn-id: link to svn.lifesci.dundee.ac.uk/svn/barton/ptroshin/JABA2@3425 e3abac25-378b-4346-85de-24260fe3988d

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pvtroshin [Fri, 3 Dec 2010 16:12:13 +0000 (16:12 +0000)]

AAConWS further work and test cases

git-svn-id: link to svn.lifesci.dundee.ac.uk/svn/barton/ptroshin/JABA2@3424 e3abac25-378b-4346-85de-24260fe3988d

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pvtroshin [Thu, 2 Dec 2010 18:16:47 +0000 (18:16 +0000)]

Better name for AACon WS test

git-svn-id: link to svn.lifesci.dundee.ac.uk/svn/barton/ptroshin/JABA2@3417 e3abac25-378b-4346-85de-24260fe3988d

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pvtroshin [Thu, 2 Dec 2010 16:56:31 +0000 (16:56 +0000)]

AAConWS is working

git-svn-id: link to svn.lifesci.dundee.ac.uk/svn/barton/ptroshin/JABA2@3416 e3abac25-378b-4346-85de-24260fe3988d

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pvtroshin [Mon, 29 Nov 2010 22:06:31 +0000 (22:06 +0000)]

AAConWS further work

git-svn-id: link to svn.lifesci.dundee.ac.uk/svn/barton/ptroshin/JABA2@3407 e3abac25-378b-4346-85de-24260fe3988d

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pvtroshin [Mon, 29 Nov 2010 22:05:57 +0000 (22:05 +0000)]

AAConWS further work

git-svn-id: link to svn.lifesci.dundee.ac.uk/svn/barton/ptroshin/JABA2@3406 e3abac25-378b-4346-85de-24260fe3988d

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pvtroshin [Wed, 24 Nov 2010 15:08:11 +0000 (15:08 +0000)]

Get rid of unnecessary duplication of config files.

git-svn-id: link to svn.lifesci.dundee.ac.uk/svn/barton/ptroshin/JABA2@3392 e3abac25-378b-4346-85de-24260fe3988d

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pvtroshin [Wed, 24 Nov 2010 14:27:11 +0000 (14:27 +0000)]

Changes from JWS2 branch concerning local execution and logging

git-svn-id: link to svn.lifesci.dundee.ac.uk/svn/barton/ptroshin/JABA2@3389 e3abac25-378b-4346-85de-24260fe3988d

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pvtroshin [Wed, 24 Nov 2010 14:25:26 +0000 (14:25 +0000)]

Add LoadBalancer and Limit testers from JWS2 branch

git-svn-id: link to svn.lifesci.dundee.ac.uk/svn/barton/ptroshin/JABA2@3388 e3abac25-378b-4346-85de-24260fe3988d

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pvtroshin [Wed, 24 Nov 2010 14:24:04 +0000 (14:24 +0000)]

Tests for AACon loader

git-svn-id: link to svn.lifesci.dundee.ac.uk/svn/barton/ptroshin/JABA2@3387 e3abac25-378b-4346-85de-24260fe3988d

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pvtroshin [Wed, 24 Nov 2010 13:13:11 +0000 (13:13 +0000)]

Dundee specific settings from JWS2 branch

git-svn-id: link to svn.lifesci.dundee.ac.uk/svn/barton/ptroshin/JABA2@3385 e3abac25-378b-4346-85de-24260fe3988d

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pvtroshin [Wed, 24 Nov 2010 13:12:35 +0000 (13:12 +0000)]

Dundee specific settings from JWS2 branch

git-svn-id: link to svn.lifesci.dundee.ac.uk/svn/barton/ptroshin/JABA2@3384 e3abac25-378b-4346-85de-24260fe3988d

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pvtroshin [Wed, 24 Nov 2010 13:07:42 +0000 (13:07 +0000)]

More work on AAConWS not finished yet!

git-svn-id: link to svn.lifesci.dundee.ac.uk/svn/barton/ptroshin/JABA2@3383 e3abac25-378b-4346-85de-24260fe3988d

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pvtroshin [Wed, 24 Nov 2010 13:04:56 +0000 (13:04 +0000)]

update from JWS2

git-svn-id: link to svn.lifesci.dundee.ac.uk/svn/barton/ptroshin/JABA2@3382 e3abac25-378b-4346-85de-24260fe3988d

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pvtroshin [Wed, 24 Nov 2010 13:03:38 +0000 (13:03 +0000)]

add images from JWS2 branch

git-svn-id: link to svn.lifesci.dundee.ac.uk/svn/barton/ptroshin/JABA2@3381 e3abac25-378b-4346-85de-24260fe3988d

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pvtroshin [Wed, 24 Nov 2010 13:02:54 +0000 (13:02 +0000)]

remove old images

git-svn-id: link to svn.lifesci.dundee.ac.uk/svn/barton/ptroshin/JABA2@3380 e3abac25-378b-4346-85de-24260fe3988d

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pvtroshin [Wed, 24 Nov 2010 13:00:10 +0000 (13:00 +0000)]

Add updated javadoc from JWS2 branch

git-svn-id: link to svn.lifesci.dundee.ac.uk/svn/barton/ptroshin/JABA2@3379 e3abac25-378b-4346-85de-24260fe3988d

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pvtroshin [Wed, 24 Nov 2010 12:59:05 +0000 (12:59 +0000)]

remove old javadoc

git-svn-id: link to svn.lifesci.dundee.ac.uk/svn/barton/ptroshin/JABA2@3378 e3abac25-378b-4346-85de-24260fe3988d

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pvtroshin [Wed, 24 Nov 2010 12:48:49 +0000 (12:48 +0000)]

Adding changes from JWS2 branch. Fixes for Limit in particular

git-svn-id: link to svn.lifesci.dundee.ac.uk/svn/barton/ptroshin/JABA2@3377 e3abac25-378b-4346-85de-24260fe3988d

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pvtroshin [Wed, 24 Nov 2010 12:43:52 +0000 (12:43 +0000)]

More work on AAConWS not finished yet!

git-svn-id: link to svn.lifesci.dundee.ac.uk/svn/barton/ptroshin/JABA2@3376 e3abac25-378b-4346-85de-24260fe3988d

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pvtroshin [Mon, 22 Nov 2010 15:38:01 +0000 (15:38 +0000)]

Java doc and package infos from JWS" branch. Also rethink of MSAWS interface in light of new web services e.g. AACon web service.

git-svn-id: link to svn.lifesci.dundee.ac.uk/svn/barton/ptroshin/JABA2@3345 e3abac25-378b-4346-85de-24260fe3988d

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pvtroshin [Mon, 22 Nov 2010 15:29:47 +0000 (15:29 +0000)]

Changes from JWS2 branch merged, mostly javadoc

git-svn-id: link to svn.lifesci.dundee.ac.uk/svn/barton/ptroshin/JABA2@3344 e3abac25-378b-4346-85de-24260fe3988d

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pvtroshin [Mon, 22 Nov 2010 15:09:13 +0000 (15:09 +0000)]

Adding AAConWS

git-svn-id: link to svn.lifesci.dundee.ac.uk/svn/barton/ptroshin/JABA2@3343 e3abac25-378b-4346-85de-24260fe3988d

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pvtroshin [Fri, 19 Nov 2010 16:02:09 +0000 (16:02 +0000)]

Add updated web site from JWS2 branch

git-svn-id: link to svn.lifesci.dundee.ac.uk/svn/barton/ptroshin/JABA2@3338 e3abac25-378b-4346-85de-24260fe3988d

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pvtroshin [Fri, 19 Nov 2010 15:50:01 +0000 (15:50 +0000)]

Remove old versions of web site

git-svn-id: link to svn.lifesci.dundee.ac.uk/svn/barton/ptroshin/JABA2@3337 e3abac25-378b-4346-85de-24260fe3988d

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pvtroshin [Thu, 19 Aug 2010 14:52:02 +0000 (14:52 +0000)]

updates to jaba2 from jaba release branch

git-svn-id: link to svn.lifesci.dundee.ac.uk/svn/barton/ptroshin/JABA2@2922 e3abac25-378b-4346-85de-24260fe3988d

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pvtroshin [Thu, 19 Aug 2010 14:43:32 +0000 (14:43 +0000)]

updates to jaba2 from jaba release branch

git-svn-id: link to svn.lifesci.dundee.ac.uk/svn/barton/ptroshin/JABA2@2921 e3abac25-378b-4346-85de-24260fe3988d

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pvtroshin [Thu, 19 Aug 2010 14:36:46 +0000 (14:36 +0000)]

updates to jaba2 from jaba release branch

git-svn-id: link to svn.lifesci.dundee.ac.uk/svn/barton/ptroshin/JABA2@2919 e3abac25-378b-4346-85de-24260fe3988d

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pvtroshin [Thu, 19 Aug 2010 10:25:41 +0000 (10:25 +0000)]

Fixed version of Preset class from JABA_r1 branch (see bug JWS-19)

git-svn-id: link to svn.lifesci.dundee.ac.uk/svn/barton/ptroshin/JABA2@2907 e3abac25-378b-4346-85de-24260fe3988d

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pvtroshin [Mon, 26 Jul 2010 18:23:44 +0000 (18:23 +0000)]

Adding disembl wrapper

git-svn-id: link to svn.lifesci.dundee.ac.uk/svn/barton/ptroshin/JABA2@2685 e3abac25-378b-4346-85de-24260fe3988d

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pvtroshin [Fri, 23 Jul 2010 13:15:01 +0000 (13:15 +0000)]

Jronn multi core support

git-svn-id: link to svn.lifesci.dundee.ac.uk/svn/barton/ptroshin/JABA2@2666 e3abac25-378b-4346-85de-24260fe3988d

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pvtroshin [Thu, 22 Jul 2010 13:17:08 +0000 (13:17 +0000)]

Set number of thread for execution

git-svn-id: link to svn.lifesci.dundee.ac.uk/svn/barton/ptroshin/JABA2@2652 e3abac25-378b-4346-85de-24260fe3988d

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pvtroshin [Thu, 22 Jul 2010 12:59:22 +0000 (12:59 +0000)]

Some refactoring

git-svn-id: link to svn.lifesci.dundee.ac.uk/svn/barton/ptroshin/JABA2@2651 e3abac25-378b-4346-85de-24260fe3988d

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pvtroshin [Thu, 22 Jul 2010 12:22:47 +0000 (12:22 +0000)]

getStatistics test method fixed

git-svn-id: link to svn.lifesci.dundee.ac.uk/svn/barton/ptroshin/JABA2@2650 e3abac25-378b-4346-85de-24260fe3988d

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pvtroshin [Thu, 22 Jul 2010 11:13:08 +0000 (11:13 +0000)]

Jronn tester

git-svn-id: link to svn.lifesci.dundee.ac.uk/svn/barton/ptroshin/JABA2@2648 e3abac25-378b-4346-85de-24260fe3988d

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pvtroshin [Wed, 21 Jul 2010 16:56:53 +0000 (16:56 +0000)]

Add local engine properties back to version control

git-svn-id: link to svn.lifesci.dundee.ac.uk/svn/barton/ptroshin/JABA2@2646 e3abac25-378b-4346-85de-24260fe3988d

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pvtroshin [Wed, 21 Jul 2010 16:27:56 +0000 (16:27 +0000)]

Add JRonn runner, tester, methods to parse jronn output files.

git-svn-id: link to svn.lifesci.dundee.ac.uk/svn/barton/ptroshin/JABA2@2638 e3abac25-378b-4346-85de-24260fe3988d

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pvtroshin [Tue, 20 Jul 2010 12:51:03 +0000 (12:51 +0000)]

Fix copyright header

git-svn-id: link to svn.lifesci.dundee.ac.uk/svn/barton/ptroshin/JABA2@2612 e3abac25-378b-4346-85de-24260fe3988d

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pvtroshin [Tue, 20 Jul 2010 12:48:05 +0000 (12:48 +0000)]

Changes from JWS3 is merged
From now on JWS3 project should not contain any new data. To be deleted later

git-svn-id: link to svn.lifesci.dundee.ac.uk/svn/barton/ptroshin/JABA2@2611 e3abac25-378b-4346-85de-24260fe3988d

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pvtroshin [Tue, 20 Jul 2010 11:44:34 +0000 (11:44 +0000)]

Next version of JABA

git-svn-id: link to svn.lifesci.dundee.ac.uk/svn/barton/ptroshin/JABA2@2610 e3abac25-378b-4346-85de-24260fe3988d