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Suzanne Duce [Fri, 5 Dec 2014 16:30:10 +0000 (16:30 +0000)]
second commit (to test the process)
Suzanne Duce [Fri, 5 Dec 2014 15:48:45 +0000 (15:48 +0000)]
Updates for London 2014 workshop
Jim Procter [Sun, 7 Apr 2013 23:39:59 +0000 (23:39 +0000)]
included instructions to use ps2pdf to reduce the size of file generated by pdflatex, and to ensure that special symbols are preserved in the 'optimised for screen' version generated by Adobe Distiller.
Jim Procter [Fri, 1 Feb 2013 17:16:49 +0000 (17:16 +0000)]
v1.4.1 manual
Jim Procter [Fri, 1 Feb 2013 17:11:46 +0000 (17:11 +0000)]
Manual version 1.4.1 updated 18th January for Version 2.8 and EMBL-EBI course
Jim Procter [Fri, 1 Feb 2013 17:10:21 +0000 (17:10 +0000)]
v2.8 new website and logo
Jim Procter [Fri, 1 Feb 2013 17:10:10 +0000 (17:10 +0000)]
v 2.8 logo and new top level help page
Jim Procter [Fri, 1 Feb 2013 17:09:55 +0000 (17:09 +0000)]
v 2.8 logo and authors
Jim Procter [Fri, 1 Feb 2013 17:09:38 +0000 (17:09 +0000)]
v 2.8 capabilitis
Jim Procter [Fri, 1 Feb 2013 17:09:23 +0000 (17:09 +0000)]
v2.8 new database selector for sequence fetcher
Jim Procter [Fri, 1 Feb 2013 17:09:04 +0000 (17:09 +0000)]
2.8 per sequence annotation colouring
Jim Procter [Fri, 1 Feb 2013 17:08:51 +0000 (17:08 +0000)]
2.8 colourschemes
Jim Procter [Fri, 1 Feb 2013 17:08:20 +0000 (17:08 +0000)]
revised pca in v2.8
Jim Procter [Fri, 1 Feb 2013 17:07:52 +0000 (17:07 +0000)]
alignment services in v2.8
Jim Procter [Fri, 1 Feb 2013 17:07:30 +0000 (17:07 +0000)]
v2.8 jabaws config with server status
Jim Procter [Fri, 1 Feb 2013 17:07:02 +0000 (17:07 +0000)]
v2.8 ws menu
Jim Procter [Fri, 1 Feb 2013 17:06:44 +0000 (17:06 +0000)]
v2.8 sequence disorder
Jim Procter [Fri, 1 Feb 2013 17:06:11 +0000 (17:06 +0000)]
v2.8 sequence details window
Jim Procter [Fri, 1 Feb 2013 17:03:43 +0000 (17:03 +0000)]
ignore intermediate files
Jim Procter [Thu, 10 Jan 2013 18:01:17 +0000 (18:01 +0000)]
updated tutorial for Jalview 2.7 - includes contributions from Saif Shehata
(changes were made in June 2012)
Jim Procter [Mon, 5 Dec 2011 10:35:09 +0000 (10:35 +0000)]
update to 1.3.01
Jim Procter [Mon, 5 Dec 2011 10:28:44 +0000 (10:28 +0000)]
fix left-right page numbering and incorrect menu item
Jim Procter [Tue, 29 Nov 2011 07:29:41 +0000 (07:29 +0000)]
updated screen optimized version
Jim Procter [Tue, 29 Nov 2011 07:19:05 +0000 (07:19 +0000)]
updated master document with dna alignment tools table
Jim Procter [Tue, 29 Nov 2011 07:17:01 +0000 (07:17 +0000)]
completed table of jabaws alignment services useful for DNA
Jim Procter [Mon, 28 Nov 2011 16:14:25 +0000 (16:14 +0000)]
jalview manual v1.3 - updated for v2.7 of Jalview with new material for structure superposition and JABA server config.
Jim Procter [Mon, 28 Nov 2011 16:10:52 +0000 (16:10 +0000)]
drag and drop association of PDB structures
Jim Procter [Mon, 28 Nov 2011 16:10:41 +0000 (16:10 +0000)]
colour by .. submenu figure
Jim Procter [Mon, 28 Nov 2011 16:10:12 +0000 (16:10 +0000)]
dnmt1_mouse complex domain alignment colouring example
Jim Procter [Mon, 28 Nov 2011 16:09:21 +0000 (16:09 +0000)]
jv2.7 rss newsreader
Jim Procter [Mon, 28 Nov 2011 16:09:11 +0000 (16:09 +0000)]
jabaws config panel in jalview preferences
Jim Procter [Mon, 28 Nov 2011 16:08:59 +0000 (16:08 +0000)]
jv2.7 capabilities diagram
Jim Procter [Mon, 28 Nov 2011 16:08:48 +0000 (16:08 +0000)]
alignment web service parameters from html help
Jim Procter [Mon, 28 Nov 2011 16:08:34 +0000 (16:08 +0000)]
ferredoxin structure superposition
Jim Procter [Mon, 28 Nov 2011 16:08:15 +0000 (16:08 +0000)]
slider from clustal parameters
Jim Procter [Mon, 28 Nov 2011 16:07:55 +0000 (16:07 +0000)]
v2.7 splash screen
Jim Procter [Mon, 28 Nov 2011 16:07:45 +0000 (16:07 +0000)]
v2.7 startup screen
Jim Procter [Mon, 28 Nov 2011 16:07:34 +0000 (16:07 +0000)]
jaba style alignment submission
Jim Procter [Mon, 28 Nov 2011 16:07:22 +0000 (16:07 +0000)]
reordered web services menu
Jim Procter [Mon, 28 Nov 2011 16:06:57 +0000 (16:06 +0000)]
files for superposition exercises
Jim Procter [Fri, 6 May 2011 14:42:05 +0000 (14:42 +0000)]
rude typo fixed
Jim Procter [Fri, 4 Mar 2011 14:30:16 +0000 (14:30 +0000)]
patches from Dundee Tutorial on Feb 2011
Jim Procter [Fri, 4 Mar 2011 14:20:15 +0000 (14:20 +0000)]
patches from Dundee Tutorial on Feb 2011
Jim Procter [Mon, 11 Oct 2010 15:27:19 +0000 (15:27 +0000)]
patched layout and fixed some typos noticed by tutee at 4th October 2010 session in oxford
Jim Procter [Mon, 11 Oct 2010 15:13:23 +0000 (15:13 +0000)]
patched layout and fixed some typos noticed by tutee at 4th October 2010 session in oxford
Jim Procter [Mon, 14 Jun 2010 09:10:58 +0000 (09:10 +0000)]
spellchecking
Jim Procter [Tue, 8 Jun 2010 16:50:02 +0000 (16:50 +0000)]
jalview 2.5 updates
Jim Procter [Fri, 9 Jan 2009 14:10:11 +0000 (14:10 +0000)]
screen optimized PDF
Jim Procter [Fri, 9 Jan 2009 14:09:55 +0000 (14:09 +0000)]
Settings for screen optimized PDF
Jim Procter [Fri, 9 Jan 2009 13:56:38 +0000 (13:56 +0000)]
removed enfin fp workshop from front page
Jim Procter [Sat, 30 Aug 2008 16:53:09 +0000 (16:53 +0000)]
final version (draft) for EBI/Enfin Function Prediction Course
Jim Procter [Sat, 30 Aug 2008 16:52:22 +0000 (16:52 +0000)]
more ignores
Jim Procter [Sat, 30 Aug 2008 16:52:06 +0000 (16:52 +0000)]
resized
Jim Procter [Sat, 30 Aug 2008 16:51:53 +0000 (16:51 +0000)]
updated example PFAM accession
Jim Procter [Thu, 28 Aug 2008 09:10:11 +0000 (09:10 +0000)]
first ebi tutorial draft for 2.4 release
Jim Procter [Thu, 14 Aug 2008 15:33:42 +0000 (15:33 +0000)]
original tutorial put online for version 2.2
git://source.jalview.org / jalview-manual.git / log