proteocache.git
11 years agoUpdate classpath
Sasha Sherstnev [Fri, 8 Nov 2013 13:49:38 +0000 (13:49 +0000)]
Update classpath

11 years agoUpdated website
Sasha Sherstnev [Fri, 8 Nov 2013 13:47:37 +0000 (13:47 +0000)]
Updated website

11 years agoUpdated website
Sasha Sherstnev [Fri, 8 Nov 2013 13:47:17 +0000 (13:47 +0000)]
Updated website

11 years agoRemove keyspace name from queries
Sasha Sherstnev [Fri, 8 Nov 2013 13:46:48 +0000 (13:46 +0000)]
Remove keyspace name from queries

11 years agoFix problems with Natasha's code
Sasha Sherstnev [Fri, 8 Nov 2013 13:28:29 +0000 (13:28 +0000)]
Fix problems with Natasha's code

11 years agofix data report, protein report
Natasha Sherstneva [Thu, 7 Nov 2013 13:32:02 +0000 (13:32 +0000)]
fix data report, protein report

Conflicts:
.classpath
datadb/compbio/cassandra/CassandraNativeConnector.java

11 years agoAdd lost JRE
Sasha Sherstnev [Fri, 8 Nov 2013 13:10:05 +0000 (13:10 +0000)]
Add lost JRE

11 years agoadd class with structure
Natasha Sherstneva [Thu, 7 Nov 2013 14:09:34 +0000 (14:09 +0000)]
add class with structure

11 years agofix data report, protein report
Natasha Sherstneva [Thu, 7 Nov 2013 13:32:02 +0000 (13:32 +0000)]
fix data report, protein report

Conflicts:
.classpath
datadb/compbio/cassandra/CassandraNativeConnector.java
website/AllReports.jsp

11 years agoStill not-working system for reading cassandra
Sasha Sherstnev [Fri, 8 Nov 2013 12:11:41 +0000 (12:11 +0000)]
Still not-working system for reading cassandra

11 years agoImproved cassandra support
Sasha Sherstnev [Fri, 8 Nov 2013 12:11:18 +0000 (12:11 +0000)]
Improved cassandra support

11 years agoStart documentation
Sasha Sherstnev [Fri, 8 Nov 2013 11:26:45 +0000 (11:26 +0000)]
Start documentation

11 years agofix query log info, jobs by counter
Natasha Sherstneva [Fri, 8 Nov 2013 11:10:46 +0000 (11:10 +0000)]
fix query log info, jobs by counter

11 years agoAdd PropertyHelper for running ProteoCache
Sasha Sherstnev [Fri, 8 Nov 2013 10:22:23 +0000 (10:22 +0000)]
Add PropertyHelper for running ProteoCache

11 years agoAdd properties configuration to the system
Sasha Sherstnev [Fri, 8 Nov 2013 10:21:41 +0000 (10:21 +0000)]
Add properties configuration to the system

11 years agoFix logging system and add jabaws libs into the system
Sasha Sherstnev [Fri, 8 Nov 2013 10:20:24 +0000 (10:20 +0000)]
Fix logging system and add jabaws libs into the system

11 years agoadd class with structure
Natasha Sherstneva [Thu, 7 Nov 2013 14:09:34 +0000 (14:09 +0000)]
add class with structure

11 years agofix data report, protein report
Natasha Sherstneva [Thu, 7 Nov 2013 13:32:02 +0000 (13:32 +0000)]
fix data report, protein report

11 years agoRestore one servlet
Sasha Sherstnev [Tue, 5 Nov 2013 14:18:16 +0000 (14:18 +0000)]
Restore one servlet

11 years agoRestore libraries for JSP tags
Sasha Sherstnev [Tue, 5 Nov 2013 14:17:02 +0000 (14:17 +0000)]
Restore libraries for JSP tags

11 years agoFirst working "writing" code for Cassandra 2.0
Sasha Sherstnev [Mon, 4 Nov 2013 21:17:39 +0000 (21:17 +0000)]
First working "writing" code for Cassandra 2.0

11 years agoAdd new still not-working code for native binary protocol version
Sasha Sherstnev [Sat, 2 Nov 2013 12:06:23 +0000 (12:06 +0000)]
Add new still not-working code for native binary protocol version

Conflicts:
server/compbio/statistic/StatisticsProt.java

11 years agoImprove JSP pages
Sasha Sherstnev [Sat, 2 Nov 2013 10:35:05 +0000 (10:35 +0000)]
Improve JSP pages

Conflicts:
website/ReportLength.jsp

11 years agoUpdate basic jars: from Thrift to native banary protocol (2)
Sasha Sherstnev [Sat, 2 Nov 2013 10:33:53 +0000 (10:33 +0000)]
Update basic jars: from Thrift to native banary protocol (2)

11 years agoUpdate basic jars: from Thrift to native banary protocol
Sasha Sherstnev [Sat, 2 Nov 2013 10:32:59 +0000 (10:32 +0000)]
Update basic jars: from Thrift to native banary protocol

11 years agoAdd Jpred archive table
Sasha Sherstnev [Tue, 5 Nov 2013 14:51:38 +0000 (14:51 +0000)]
Add Jpred archive table

11 years agoRestore one servlet
Sasha Sherstnev [Tue, 5 Nov 2013 14:18:16 +0000 (14:18 +0000)]
Restore one servlet

11 years agoRestore libraries for JSP tags
Sasha Sherstnev [Tue, 5 Nov 2013 14:17:02 +0000 (14:17 +0000)]
Restore libraries for JSP tags

11 years agoFirst working "writing" code for Cassandra 2.0
Sasha Sherstnev [Mon, 4 Nov 2013 21:17:39 +0000 (21:17 +0000)]
First working "writing" code for Cassandra 2.0

11 years agoNew JPS code
Sasha Sherstnev [Sat, 2 Nov 2013 12:10:41 +0000 (12:10 +0000)]
New JPS code

11 years agoAdd new still not-working code for native binary protocol version
Sasha Sherstnev [Sat, 2 Nov 2013 12:06:23 +0000 (12:06 +0000)]
Add new still not-working code for native binary protocol version

11 years agoImprove JSP pages
Sasha Sherstnev [Sat, 2 Nov 2013 10:35:05 +0000 (10:35 +0000)]
Improve JSP pages

11 years agoUpdate basic jars: from Thrift to native banary protocol (2)
Sasha Sherstnev [Sat, 2 Nov 2013 10:33:53 +0000 (10:33 +0000)]
Update basic jars: from Thrift to native banary protocol (2)

11 years agoUpdate basic jars: from Thrift to native banary protocol
Sasha Sherstnev [Sat, 2 Nov 2013 10:32:59 +0000 (10:32 +0000)]
Update basic jars: from Thrift to native banary protocol

11 years agoSome new servlet code
Sasha Sherstnev [Thu, 31 Oct 2013 22:54:13 +0000 (22:54 +0000)]
Some new servlet code

11 years agoAdd comments and make Time execution report more granular
Sasha Sherstnev [Wed, 30 Oct 2013 09:17:34 +0000 (09:17 +0000)]
Add comments and make Time execution report more granular

11 years agoMerge branch 'master' of https://source.jalview.org/git/proteocache
Sasha Sherstnev [Tue, 29 Oct 2013 22:35:47 +0000 (22:35 +0000)]
Merge branch 'master' of https://source.jalview.org/git/proteocache

11 years agoRemove surplus code
Sasha Sherstnev [Tue, 29 Oct 2013 22:34:36 +0000 (22:34 +0000)]
Remove surplus code

11 years agoFix problem with dates
Sasha Sherstnev [Tue, 29 Oct 2013 22:31:27 +0000 (22:31 +0000)]
Fix problem with dates

11 years agonothing change
Sasha Sherstnev [Tue, 29 Oct 2013 16:25:30 +0000 (16:25 +0000)]
nothing change

11 years agodone time execution for queries, query by counter of job, total in column in query...
Sasha Sherstnev [Tue, 29 Oct 2013 14:59:46 +0000 (14:59 +0000)]
done time execution for queries, query by counter of job, total in column in query by execution time of job

11 years agoFix problem with too many open files and problem with not-flushed
Sasha Sherstnev [Tue, 29 Oct 2013 10:59:56 +0000 (10:59 +0000)]
Fix problem with too many open files and problem with not-flushed
info

11 years agoAdd still not-working code for the 2nd cassandra call
Sasha Sherstnev [Mon, 28 Oct 2013 20:24:39 +0000 (20:24 +0000)]
Add still not-working code for the 2nd cassandra call

11 years agoMake internal variable private
Sasha Sherstnev [Mon, 28 Oct 2013 20:24:16 +0000 (20:24 +0000)]
Make internal variable private

11 years agoFix bug with wrong source file
Sasha Sherstnev [Mon, 28 Oct 2013 20:23:42 +0000 (20:23 +0000)]
Fix bug with wrong source file

11 years agoRemove surplus code and add format of the source file
Sasha Sherstnev [Mon, 28 Oct 2013 20:22:05 +0000 (20:22 +0000)]
Remove surplus code and add format of the source file

11 years agoApply formatting
Sasha Sherstnev [Mon, 28 Oct 2013 20:21:19 +0000 (20:21 +0000)]
Apply formatting

11 years agoSimplify servlets
Sasha Sherstnev [Mon, 28 Oct 2013 20:20:47 +0000 (20:20 +0000)]
Simplify servlets

11 years agoOptimize code
Sasha Sherstnev [Mon, 28 Oct 2013 20:20:16 +0000 (20:20 +0000)]
Optimize code

11 years agoApply formatting to the JSP pages
Sasha Sherstnev [Mon, 28 Oct 2013 20:18:54 +0000 (20:18 +0000)]
Apply formatting to the JSP pages

11 years agoAdd another parser for local files with metainformation
Sasha Sherstnev [Sat, 26 Oct 2013 09:43:23 +0000 (10:43 +0100)]
Add another parser for local files with metainformation

11 years agoAdd some necessary files
Sasha Sherstnev [Thu, 24 Oct 2013 17:27:58 +0000 (18:27 +0100)]
Add some necessary files

11 years agoModify project configuration
Sasha Sherstnev [Thu, 24 Oct 2013 17:27:29 +0000 (18:27 +0100)]
Modify project configuration

11 years agoAdd first banch of JSPs
Sasha Sherstnev [Thu, 24 Oct 2013 17:27:00 +0000 (18:27 +0100)]
Add first banch of JSPs

11 years agoModify servlet configuration
Sasha Sherstnev [Thu, 24 Oct 2013 17:25:48 +0000 (18:25 +0100)]
Modify servlet configuration

11 years agoFirst working code
Sasha Sherstnev [Thu, 24 Oct 2013 17:25:29 +0000 (18:25 +0100)]
First working code

11 years agoRemove JABAWS testing code
Sasha Sherstnev [Thu, 24 Oct 2013 14:13:39 +0000 (15:13 +0100)]
Remove JABAWS testing code

11 years agoRemove old libraries
Sasha Sherstnev [Thu, 24 Oct 2013 14:13:02 +0000 (15:13 +0100)]
Remove old libraries

11 years agoDelete JABAWS testing codes
Sasha Sherstnev [Thu, 24 Oct 2013 14:12:35 +0000 (15:12 +0100)]
Delete JABAWS testing codes

11 years agoSome lost files
Sasha Sherstnev [Wed, 23 Oct 2013 16:38:26 +0000 (17:38 +0100)]
Some lost files

11 years agoAdd testing dirs
Sasha Sherstnev [Wed, 23 Oct 2013 16:38:05 +0000 (17:38 +0100)]
Add testing dirs

11 years agoRename projecet
Sasha Sherstnev [Wed, 23 Oct 2013 16:37:52 +0000 (17:37 +0100)]
Rename projecet

11 years agoFirst commit into ProteoCache (some basic files from JABAWS)
Sasha Sherstnev [Wed, 23 Oct 2013 16:19:18 +0000 (17:19 +0100)]
First commit into ProteoCache (some basic files from JABAWS)