From 11ca0240a5792724d5e890de9fbd63cb2f11093a Mon Sep 17 00:00:00 2001 From: Jim Procter Date: Fri, 17 Nov 2017 13:51:25 +0000 Subject: [PATCH] =?utf8?q?JAL-2698=20what=E2=80=99s=20new=20and=20release=20?= =?utf8?q?notes?= MIME-Version: 1.0 Content-Type: text/plain; charset=utf8 Content-Transfer-Encoding: 8bit --- help/helpTOC.xml | 1 - help/html/releases.html | 18 +++++++++--------- help/html/whatsNew.html | 24 +++++++++++++----------- 3 files changed, 22 insertions(+), 21 deletions(-) diff --git a/help/helpTOC.xml b/help/helpTOC.xml index 7ba4ee5..20dd8db 100755 --- a/help/helpTOC.xml +++ b/help/helpTOC.xml @@ -24,7 +24,6 @@ - diff --git a/help/html/releases.html b/help/html/releases.html index 8dad7eb..3e701f9 100755 --- a/help/html/releases.html +++ b/help/html/releases.html @@ -148,23 +148,16 @@ li:before {
  • Double residue highlights in cursor mode if new selection moves alignment window
  • Alignment vanishes when using arrow key in cursor mode to pass hidden column marker
    • - Applet
    + >Applet
    • Concurrent modification exception when closing alignment panel
    - BioJSON
    + BioJSON
    • BioJSON export does not preserve non-positional features
    - Known Java 9 Issues -
      -
    • Groovy Console very slow to open and is - not responsive when entering characters (Webstart, Java 9.01, - OSX 10.10) -
      • -
    New Known Issues
    • Delete/Cut selection doesn't relocate sequence features correctly (for many previous versions of Jalview)
      • @@ -172,6 +165,13 @@ li:before {
    • Select columns containing feature ignores graduated colour threshold
    • Edit sequence operation doesn't always preserve numbering and sequence features
    + Known Java 9 Issues +
      +
    • Groovy Console very slow to open and is + not responsive when entering characters (Webstart, Java 9.01, + OSX 10.10) +
      • +
    diff --git a/help/html/whatsNew.html b/help/html/whatsNew.html index d92f26b..6901f61 100755 --- a/help/html/whatsNew.html +++ b/help/html/whatsNew.html @@ -33,22 +33,24 @@ the highlights are below.

      -
    • Faster import and more responsive UI when working with wide alignments and handling hundreds and thousands of sequence features
      • -
    • -
    • Improved usability with PDB and - UniProt Free Text Search - dialog, and new tab for retrieval of sequences for lists of IDs.
      • -
    • Short names assigned to sequences retrieved from UniProt
      • +
    • Faster and more responsive UI when importing and working + with wide alignments and handling hundreds and thousands of + sequence features
      • +
    • Improved usability with PDB and UniProt Free Text + Search dialog, and new tab for retrieval of sequences for lists of + IDs. +
      • +
    • Short names assigned to sequences retrieved from UniProt

    Experimental Features

    - This release of Jalview introduces an Experimental Features - option in the Jalview Desktop's Tools menu that allows you - to try out features that are still in development. To access the - experimental features below - first enable the Tools→Enable - Experimental Features option, and then restart Jalview. + Remember, please enable the Experimental Features option in + the Jalview Desktop's Tools menu, and then restart Jalview + if you want to try out features below:

    • Annotation transfer between Chimera and Jalview
      Two -- 1.7.10.2