From 3730e4595539cb99e991f326f0ed4dff6e2c3767 Mon Sep 17 00:00:00 2001 From: Jim Procter Date: Tue, 4 Oct 2016 10:55:47 +0100 Subject: [PATCH] JAL-2189 JAL-2005 mention alignment order preservation when equivalent sequences are sorted. --- help/html/calculations/sorting.html | 10 ++++++---- 1 file changed, 6 insertions(+), 4 deletions(-) diff --git a/help/html/calculations/sorting.html b/help/html/calculations/sorting.html index 8c017a9..5b6f616 100755 --- a/help/html/calculations/sorting.html +++ b/help/html/calculations/sorting.html @@ -88,10 +88,12 @@

Selecting any item from the Sort menu will sort sequences in an ascending order according to the property defining the sort. If the same sort is re-applied, the sequences will be sorted in the inverse - order. In the case of trees and alignment orderings, Jalview will - remember your last choice for sorting the alignment and only apply - the inverse ordering if you select the same tree or alignment - ordering item again.

+ order. In both cases, for sequences which are equivalent under the sort + operation, their order will be preserved (since version 2.10). In + the case of trees and alignment orderings, Jalview will remember + your last choice for sorting the alignment and only apply the + inverse ordering if you select the same tree or alignment ordering + item again.

-- 1.7.10.2