From c4aa2ad9833368805aa666402c1bd2f4e359261c Mon Sep 17 00:00:00 2001 From: "cmzmasek@gmail.com" Date: Fri, 4 Jan 2013 21:34:02 +0000 Subject: [PATCH] inprogress --- forester/ruby/evoruby/lib/evo/tool/hmmscan_summary.rb | 6 ++++-- 1 file changed, 4 insertions(+), 2 deletions(-) diff --git a/forester/ruby/evoruby/lib/evo/tool/hmmscan_summary.rb b/forester/ruby/evoruby/lib/evo/tool/hmmscan_summary.rb index 1563a82..a443ca2 100644 --- a/forester/ruby/evoruby/lib/evo/tool/hmmscan_summary.rb +++ b/forester/ruby/evoruby/lib/evo/tool/hmmscan_summary.rb @@ -304,7 +304,8 @@ module Evoruby fs_e_value_threshold, hmm_for_protein_output, i_e_value_threshold, - true ) + false, + species ) end hmmscan_results_per_protein.clear end @@ -355,7 +356,8 @@ module Evoruby fs_e_value_threshold, hmm_for_protein_output, i_e_value_threshold, - uniprotkb ) + uniprotkb, + species ) dc = 0 # filter according to i-Evalue threshold -- 1.7.10.2