From f139e5531defcf77c8c8641ffb6e730e406528d6 Mon Sep 17 00:00:00 2001 From: Jim Procter Date: Tue, 26 Apr 2016 17:33:02 +0100 Subject: [PATCH] JAL-2079 use new service to retrieve Rfam Seed alignment --- src/jalview/ws/dbsources/RfamSeed.java | 7 ++++++- 1 file changed, 6 insertions(+), 1 deletion(-) diff --git a/src/jalview/ws/dbsources/RfamSeed.java b/src/jalview/ws/dbsources/RfamSeed.java index c7851f2..77fb841 100644 --- a/src/jalview/ws/dbsources/RfamSeed.java +++ b/src/jalview/ws/dbsources/RfamSeed.java @@ -42,11 +42,16 @@ public class RfamSeed extends Rfam @Override protected String getXFAMURL() { - return "http://rfam.xfam.org/family/alignment/download/format?alnType=seed&nseLabels=0&format=stockholm&acc="; + return "http://rfam.xfam.org/family/"; // Janelia Farms url // "http://rfam.janelia.org/cgi-bin/getalignment?type=seed&fmt=stockholm&acc="; } + @Override + public String getXFAMURLSUFFIX() + { + return "/alignment"; + } /* * (non-Javadoc) * -- 1.7.10.2