From 2303177fbc4c86e4a63c1e8efa8c8bc50516b6a5 Mon Sep 17 00:00:00 2001
From: gmungoc <g.m.carstairs@dundee.ac.uk>
Date: Wed, 4 May 2016 15:03:19 +0100
Subject: [PATCH] JAL-2074 corrected classpathentry for Groovy 2.4.6

---
 .classpath                   |    2 +-
 doc/AddingGroovySupport.html |    2 +-
 2 files changed, 2 insertions(+), 2 deletions(-)

diff --git a/.classpath b/.classpath
index d973eeb..65a766f 100644
--- a/.classpath
+++ b/.classpath
@@ -38,7 +38,6 @@
 	<classpathentry kind="lib" path="lib/jdas-1.0.4.jar"/>
 	<classpathentry kind="lib" path="lib/spring-core-3.0.5.RELEASE.jar"/>
 	<classpathentry kind="lib" path="lib/spring-web-3.0.5.RELEASE.jar"/>
-	<classpathentry kind="lib" path="/Users/jprocter/git/jalview/lib/groovy-all-2.4.6-indy.jar"/>
 	<classpathentry kind="lib" path="lib/min-jabaws-client-2.1.0.jar" sourcepath="/clustengine"/>
 	<classpathentry kind="lib" path="lib/json_simple-1.1.jar" sourcepath="/Users/jimp/Downloads/json_simple-1.1-all.zip"/>
 	<classpathentry kind="lib" path="lib/slf4j-api-1.7.7.jar"/>
@@ -68,5 +67,6 @@
 	<classpathentry kind="con" path="org.testng.TESTNG_CONTAINER"/>
 	<classpathentry kind="lib" path="lib/biojava-core-4.1.0.jar"/>
 	<classpathentry kind="lib" path="lib/biojava-ontology-4.1.0.jar"/>
+	<classpathentry kind="lib" path="lib/groovy-all-2.4.6-indy.jar"/>
 	<classpathentry kind="output" path="classes"/>
 </classpath>
diff --git a/doc/AddingGroovySupport.html b/doc/AddingGroovySupport.html
index 63e7170..e3e453f 100644
--- a/doc/AddingGroovySupport.html
+++ b/doc/AddingGroovySupport.html
@@ -29,7 +29,7 @@ Groovy Support in Jalview
 <p>Here are some scripts to get you started:</p>
 <ul><li>Getting the title, alignment and first sequence from the current alignFrame<br>
 <pre>
-def alf = Jalview.getAlignframes();
+def alf = Jalview.getAlignFrames();
 print alf[0].getTitle();
 def alignment = alf[0].viewport.alignment;
 def seq = alignment.getSequenceAt(0);
-- 
1.7.10.2