From 0fb619a3584d17c65273964abe933701d41d0233 Mon Sep 17 00:00:00 2001 From: jprocter Date: Tue, 5 Jul 2011 12:21:26 +0100 Subject: [PATCH] Revert "Revert "needed for linkedapplets_ng.html (JAL-859,JAL-469)"" This reverts commit 37b210ecad3c132b87c525f84e3b754a4edf12a6. --- examples/plantfdx.annotations | 7 +++++++ src/jalview/appletgui/AlignFrame.java | 3 ++- 2 files changed, 9 insertions(+), 1 deletion(-) create mode 100644 examples/plantfdx.annotations diff --git a/examples/plantfdx.annotations b/examples/plantfdx.annotations new file mode 100644 index 0000000..b4ed4a4 --- /dev/null +++ b/examples/plantfdx.annotations @@ -0,0 +1,7 @@ +JALVIEW_ANNOTATION +# Created: Mon Dec 11 10:43:00 GMT 2006 + +NO_GRAPH Secondary Structure ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||1,E|E|E|||||2,E|E|E|E|E|E|E|E|||||3,H|H|H|H|H|||||||||||Fe|||||Fe|||Fe||4,E|E||||||5,E|E|||||||||||6,H|H|H|H||7,E||||Fe|||E|E||||9,E|E|E|E|E|||||||||| +NO_GRAPH Iron Sulphur Contacts ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||Fe|||||Fe|||Fe||||||||||||||||||||||||||||||Fe|||||||||||||||||||||| +COLOUR Conservation 5d1500 +COLOUR Quality 560c00 diff --git a/src/jalview/appletgui/AlignFrame.java b/src/jalview/appletgui/AlignFrame.java index 8387089..80b01d0 100644 --- a/src/jalview/appletgui/AlignFrame.java +++ b/src/jalview/appletgui/AlignFrame.java @@ -144,7 +144,8 @@ public class AlignFrame extends EmbmenuFrame implements ActionListener, alignPanel.annotationSpaceFillerHolder.addKeyListener(this); alignPanel.alabels.addKeyListener(this); createAlignFrameWindow(embedded, title); - alignPanel.validate(); + + validate(); alignPanel.adjustAnnotationHeight(); alignPanel.paintAlignment(true); } -- 1.7.10.2