From bb5c8d98be1c4965b1a43b97f05b07e9ceb10343 Mon Sep 17 00:00:00 2001
From: jprocter
The hidden representative sequences will not be used in any calculations
or web service alignments (nb. this may change in the future).
-Warning:The representative sequence groups feature is
-not fully implemented in the jalview 2.2 release, following the
-introduction of Multiple views.
Warning:hidden +representative sequence groups are only partly implemented in the +jalview 2.2 release. When a hidden representative group is created in +one alignment view, it will be propagated to all other views. Similarly, +revealing the represented sequences in one view will reveal them in all +other views. This will be resolved in a future Jalview release.+
Hiding Columns
To hide selected columns in an alignment, use the "View
-> Hide -> Selected Columns" menu item, or right click within
diff --git a/help/html/features/multipleViews.html b/help/html/features/multipleViews.html
index 36bda32..7b17d06 100644
--- a/help/html/features/multipleViews.html
+++ b/help/html/features/multipleViews.html
@@ -40,11 +40,13 @@ to any or all other views.
A PDB Structure Viewer opened on a -structure associated with a sequence in a particular view will also, by -default, only be associated with the sequence as it is displayed in that -view. The "View→Associate View" submenu allows the -association of alternative views.
+Currently, a PDB Structure Viewer
+opened on a structure associated with a sequence in a particular view
+will only be associated with the seuqence as displayed in that view.
This
+will be resolved in a future release
Multiple Views were introduced in Jalview 2.2