From 81764c0a4a0a1807ac2a1cab2e4d99d588d09669 Mon Sep 17 00:00:00 2001
From: tcofoegbu <tcnofoegbu@dundee.ac.uk>
Date: Fri, 11 Mar 2016 18:03:21 +0000
Subject: [PATCH] JAL-1478 Fixed ArrayIndexOutOfBoundsException while
 performing NW mapping

---
 src/MCview/PDBChain.java |    4 ++++
 1 file changed, 4 insertions(+)

diff --git a/src/MCview/PDBChain.java b/src/MCview/PDBChain.java
index 228eede..7fdf11b 100755
--- a/src/MCview/PDBChain.java
+++ b/src/MCview/PDBChain.java
@@ -147,6 +147,10 @@ public class PDBChain
 
       if (as.astr1.charAt(i) == as.astr2.charAt(i))
       {
+        if (pdbpos >= residues.size())
+        {
+          continue;
+        }
         Residue res = residues.elementAt(pdbpos);
         for (Atom atom : res.atoms)
         {
-- 
1.7.10.2