From b787cf7f2898a09e5d78b8a610b657de57cc4ab9 Mon Sep 17 00:00:00 2001
From: amwaterhouse <Andrew Waterhouse>
Date: Wed, 8 Mar 2006 16:48:32 +0000
Subject: [PATCH] Pack resources in Zip file

---
 src/jalview/appletgui/AlignFrame.java |   13 +++++++++++--
 1 file changed, 11 insertions(+), 2 deletions(-)

diff --git a/src/jalview/appletgui/AlignFrame.java b/src/jalview/appletgui/AlignFrame.java
index 7b8def3..03c0db9 100755
--- a/src/jalview/appletgui/AlignFrame.java
+++ b/src/jalview/appletgui/AlignFrame.java
@@ -143,9 +143,18 @@ public class AlignFrame extends Frame implements ActionListener,
     String line = null;
     try
     {
-      URL url = new URL(file);
+      BufferedReader in = null;
+      java.io.InputStream is = getClass().getResourceAsStream("/" + file);
+      if (is != null)
+      {
+        in = new BufferedReader(new java.io.InputStreamReader(is));
+      }
+      else
+      {
+        URL url = new URL(file);
+        in = new BufferedReader(new InputStreamReader(url.openStream()));
+      }
 
-      BufferedReader in =  new BufferedReader(new InputStreamReader(url.openStream()));
       SequenceI seq = null;
       String type, desc, token;
 
-- 
1.7.10.2