From e30c8f0736f711e2dc7c32680ac57a28c77d567d Mon Sep 17 00:00:00 2001 From: amwaterhouse Date: Thu, 15 Jun 2006 12:54:39 +0000 Subject: [PATCH] Correct citation --- src/jalview/appletgui/AlignFrame.java | 2 +- src/jalview/gui/AlignFrame.java | 16 +++++++++++----- src/jalview/gui/Desktop.java | 2 +- src/jalview/gui/SplashScreen.java | 2 +- 4 files changed, 14 insertions(+), 8 deletions(-) diff --git a/src/jalview/appletgui/AlignFrame.java b/src/jalview/appletgui/AlignFrame.java index 77154e0..c4c2c5b 100755 --- a/src/jalview/appletgui/AlignFrame.java +++ b/src/jalview/appletgui/AlignFrame.java @@ -1789,7 +1789,7 @@ public void itemStateChanged(ItemEvent evt) g.drawString("If you use JalView, please cite:", x, y += fh + 8); g.drawString("\"Clamp, M., Cuff, J., Searle, S. M. and Barton, G. J. (2004), The Jalview Java Alignment Editor\"", x, y += fh); - g.drawString("Bioinformatics, 2004 12;426-7.", x, y += fh); + g.drawString("Bioinformatics, 2004 20;426-7.", x, y += fh); } } diff --git a/src/jalview/gui/AlignFrame.java b/src/jalview/gui/AlignFrame.java index a9a694c..32a50cf 100755 --- a/src/jalview/gui/AlignFrame.java +++ b/src/jalview/gui/AlignFrame.java @@ -125,11 +125,17 @@ public class AlignFrame }); - if (Desktop.desktop != null) - { - addServiceListeners(); - setGUINucleotide(al.isNucleotide()); - } + if (Desktop.desktop != null) + { + addServiceListeners(); + setGUINucleotide(al.isNucleotide()); + } + + if(jalview.bin.Cache.getDefault("WRAP_ALIGNMENT", false)) + { + wrapMenuItem.setSelected(true); + wrapMenuItem_actionPerformed(null); + } } /* Set up intrinsic listeners for dynamically generated GUI bits. */ diff --git a/src/jalview/gui/Desktop.java b/src/jalview/gui/Desktop.java index 0b88bca..374f0ea 100755 --- a/src/jalview/gui/Desktop.java +++ b/src/jalview/gui/Desktop.java @@ -513,7 +513,7 @@ public class Desktop extends jalview.jbgui.GDesktop "\nFor all issues relating to Jalview, email help@jalview.org" + "\n\nIf you use JalView, please cite:" + "\n\"Clamp, M., Cuff, J., Searle, S. M. and Barton, G. J. (2004), The Jalview Java Alignment Editor\"" + - "\nBioinformatics, 2004 12;426-7."); + "\nBioinformatics, 2004 20;426-7."); JOptionPane.showInternalMessageDialog(Desktop.desktop, diff --git a/src/jalview/gui/SplashScreen.java b/src/jalview/gui/SplashScreen.java index 05f412f..02ac84d 100755 --- a/src/jalview/gui/SplashScreen.java +++ b/src/jalview/gui/SplashScreen.java @@ -163,7 +163,7 @@ public class SplashScreen extends JPanel implements Runnable 50, y+=fontSize+4); g.drawString("If you use JalView, please cite: Clamp, M., Cuff, J., Searle, S. M. and Barton, G. J. (2004),", 50, y+=fontSize+4); - g.drawString("\"The Jalview Java Alignment Editor\" Bioinformatics, 2004 12; 426-7.", + g.drawString("\"The Jalview Java Alignment Editor\" Bioinformatics, 2004 20; 426-7.", 50, y+=fontSize+4); } } -- 1.7.10.2