From f95c61a93c12747921e69910e769b1ac308ddf4a Mon Sep 17 00:00:00 2001
From: amwaterhouse <Andrew Waterhouse>
Date: Mon, 30 Apr 2007 15:02:27 +0000
Subject: [PATCH] setVisible replaces show

---
 src/MCview/PDBViewer.java                     |    6 ++----
 src/jalview/appletgui/EditNameDialog.java     |    2 +-
 src/jalview/appletgui/FeatureRenderer.java    |    2 +-
 src/jalview/appletgui/UserDefinedColours.java |    4 ++--
 4 files changed, 6 insertions(+), 8 deletions(-)

diff --git a/src/MCview/PDBViewer.java b/src/MCview/PDBViewer.java
index b44dece..5f73f46 100755
--- a/src/MCview/PDBViewer.java
+++ b/src/MCview/PDBViewer.java
@@ -283,10 +283,8 @@ System.out.println("HOVER "+atomIndex+" "+strInfo);
      System.out.println("SHOW CONSOLE" +(scriptWindow==null));
      if (scriptWindow == null)
        return;
-     if (showConsole)
-       scriptWindow.show();
-     else
-       scriptWindow.hide();
+
+     scriptWindow.setVisible(showConsole);
    }
 
    public float functionXY(String functionName, int x, int y) {
diff --git a/src/jalview/appletgui/EditNameDialog.java b/src/jalview/appletgui/EditNameDialog.java
index 1c365ba..ca029c8 100644
--- a/src/jalview/appletgui/EditNameDialog.java
+++ b/src/jalview/appletgui/EditNameDialog.java
@@ -76,6 +76,6 @@ public class EditNameDialog extends JVDialog
       panel.add(panel2, BorderLayout.CENTER);
     }
     setMainPanel(panel);
-    show();
+    setVisible(true);
   }
 }
diff --git a/src/jalview/appletgui/FeatureRenderer.java b/src/jalview/appletgui/FeatureRenderer.java
index 6ab6060..c90fb47 100755
--- a/src/jalview/appletgui/FeatureRenderer.java
+++ b/src/jalview/appletgui/FeatureRenderer.java
@@ -295,7 +295,7 @@ public class FeatureRenderer
       }
     });
 
-    dialog.show();
+    dialog.setVisible(true);
 
     jalview.io.FeaturesFile ffile = new jalview.io.FeaturesFile();
 
diff --git a/src/jalview/appletgui/UserDefinedColours.java b/src/jalview/appletgui/UserDefinedColours.java
index 282e757..6e14146 100755
--- a/src/jalview/appletgui/UserDefinedColours.java
+++ b/src/jalview/appletgui/UserDefinedColours.java
@@ -89,7 +89,7 @@ public class UserDefinedColours
     originalLabel = "Feature Colour";
     setForDialog("Select Feature Colour", alignframe);
     setTargetColour(fr.colourPanel.getBackground());
-    dialog.show();
+    dialog.setVisible(true);
   }
 
   public UserDefinedColours(Component caller,
@@ -101,7 +101,7 @@ public class UserDefinedColours
     originalLabel = "Select Colour";
     setForDialog("Select Colour", alignframe);
     setTargetColour(col1);
-    dialog.show();
+    dialog.setVisible(true);
   }
 
 
-- 
1.7.10.2