From f2a19cf17c426b1fca94c52d6e67085921302ee9 Mon Sep 17 00:00:00 2001 From: jprocter Date: Sun, 5 Aug 2012 18:32:27 +0100 Subject: [PATCH] JAL-1131 - todos for later versions --- src/jalview/commands/EditCommand.java | 5 ++++- 1 file changed, 4 insertions(+), 1 deletion(-) diff --git a/src/jalview/commands/EditCommand.java b/src/jalview/commands/EditCommand.java index 9413ba8..d41f9f8 100644 --- a/src/jalview/commands/EditCommand.java +++ b/src/jalview/commands/EditCommand.java @@ -500,8 +500,11 @@ public class EditCommand implements CommandI fullseq = osp.substring(0, ipos) + nogaprep + osp.substring(ipos + nogaprep.length()); newds.setSequence(fullseq.toUpperCase()); - // TODO: ensure newly created dataset sequence is added to the set of + // TODO: JAL-1131 ensure newly created dataset sequence is added to the set of // dataset sequences associated with the alignment. + // TODO: JAL-1131 fix up any annotation associated with new dataset + // sequence to ensure that original sequence/annotation relationships + // are preserved. command.seqs[i].setDatasetSequence(newds); } -- 1.7.10.2