From 27b26b1735d54067bf0855ed64c41813a5d2def9 Mon Sep 17 00:00:00 2001 From: jprocter Date: Wed, 24 Oct 2007 10:59:10 +0000 Subject: [PATCH] null pointer exception and warning for update of tree --- src/jalview/io/vamsas/Tree.java | 8 ++++++-- 1 file changed, 6 insertions(+), 2 deletions(-) diff --git a/src/jalview/io/vamsas/Tree.java b/src/jalview/io/vamsas/Tree.java index 28e3c2d..a45c98d 100644 --- a/src/jalview/io/vamsas/Tree.java +++ b/src/jalview/io/vamsas/Tree.java @@ -226,14 +226,18 @@ public class Tree extends DatastoreItem * * Update jalview newick representation with TreeNode map * - * @param tp - * the treepanel that this tree is bound to. + * @param tp the treepanel that this tree is bound to. */ public void UpdateSequenceTreeMap(TreePanel tp) { if (tp == null || tree == null) return; Vector leaves = new Vector(); + if (tp.getTree()==null) + { + Cache.log.warn("Not updating SequenceTreeMap for "+tree.getVorbaId()); + return; + } tp.getTree().findLeaves(tp.getTree().getTopNode(), leaves); Treenode[] tn = tree.getTreenode(); // todo: select nodes for this // particular tree -- 1.7.10.2