From 0201d2b630e06a75fd9522f24863e9cecf8810fd Mon Sep 17 00:00:00 2001
From: amwaterhouse <Andrew Waterhouse>
Date: Wed, 15 Feb 2006 15:23:03 +0000
Subject: [PATCH] No more supergroup, set Sequence name / Description

---
 src/jalview/gui/PopupMenu.java |   48 ++++++++++++++++++++++++++--------------
 1 file changed, 32 insertions(+), 16 deletions(-)

diff --git a/src/jalview/gui/PopupMenu.java b/src/jalview/gui/PopupMenu.java
index 07b9fec..3114211 100755
--- a/src/jalview/gui/PopupMenu.java
+++ b/src/jalview/gui/PopupMenu.java
@@ -263,7 +263,7 @@ public class PopupMenu extends JPopupMenu
                 }
             });
         sequenceMenu.setText("Sequence");
-        sequenceName.setText("Edit name");
+        sequenceName.setText("Edit Name/Desciption");
         sequenceName.addActionListener(new java.awt.event.ActionListener()
             {
                 public void actionPerformed(ActionEvent e)
@@ -495,16 +495,6 @@ public class PopupMenu extends JPopupMenu
      */
     void refresh()
     {
-        SequenceGroup sg = getGroup();
-        if(sg!=null)
-        {
-          SuperGroup superG = ap.av.alignment.getSuperGroup(sg);
-
-          if (superG != null)
-          {
-            superG.setSuperGroupProperties(sg);
-          }
-        }
         if (ap.overviewPanel != null)
           ap.overviewPanel.updateOverviewImage();
 
@@ -806,11 +796,34 @@ public class PopupMenu extends JPopupMenu
      */
     void sequenceName_actionPerformed(ActionEvent e)
     {
-        String id = sequence.getName();
-        String s = (String) JOptionPane.showInternalInputDialog(ap,
-                "Edit sequence name",
-                "Edit sequence name (" + sequence.getName() + ")",
-                JOptionPane.PLAIN_MESSAGE, null, null, id);
+      JLabel idlabel = new JLabel(  "       Sequence Name ");
+      JLabel desclabel = new JLabel("Sequence Description ");
+      idlabel.setFont(new Font("Courier", Font.PLAIN, 12));
+      desclabel.setFont(new Font("Courier", Font.PLAIN, 12));
+      JTextField id = new JTextField(sequence.getName(), 40);
+      JTextField description = new JTextField(sequence.getDescription(), 40);
+      JPanel panel = new JPanel(new BorderLayout());
+      JPanel panel2 = new JPanel(new BorderLayout());
+      panel2.add(idlabel, BorderLayout.WEST);
+      panel2.add(id, BorderLayout.CENTER);
+      panel.add(panel2, BorderLayout.NORTH);
+      panel2 = new JPanel(new BorderLayout());
+      panel2.add(desclabel, BorderLayout.WEST);
+      panel2.add(description, BorderLayout.CENTER);
+      panel.add(panel2, BorderLayout.SOUTH);
+
+
+       int reply = JOptionPane.showInternalConfirmDialog(Desktop.desktop,
+          panel, "Edit Sequence Name/Description",
+          JOptionPane.OK_CANCEL_OPTION );
+
+
+        if (reply != JOptionPane.OK_OPTION )
+        {
+            return;
+        }
+
+        String s = id.getText();
 
         if (s != null)
         {
@@ -827,6 +840,9 @@ public class PopupMenu extends JPopupMenu
             sequence.setName(s);
             ap.repaint();
         }
+
+        sequence.getDatasetSequence().setDescription(description.getText());
+        sequence.setDescription(description.getText());
     }
 
     /**
-- 
1.7.10.2