From 0eaeb6c6f769b98d7604e1a1ba76225df227c762 Mon Sep 17 00:00:00 2001 From: cmzmasek Date: Thu, 7 Jun 2012 06:38:50 +0000 Subject: [PATCH] phylotastic hackathon at NESCENT 120606 --- forester/java/src/org/forester/archaeopteryx/AptxUtil.java | 2 +- .../forester/archaeopteryx/tools/AncestralTaxonomyInferrer.java | 2 +- .../src/org/forester/archaeopteryx/tools/SequenceDataRetriver.java | 4 ++-- 3 files changed, 4 insertions(+), 4 deletions(-) diff --git a/forester/java/src/org/forester/archaeopteryx/AptxUtil.java b/forester/java/src/org/forester/archaeopteryx/AptxUtil.java index f49792c..a2c4550 100644 --- a/forester/java/src/org/forester/archaeopteryx/AptxUtil.java +++ b/forester/java/src/org/forester/archaeopteryx/AptxUtil.java @@ -83,7 +83,7 @@ import org.forester.phylogeny.iterators.PreorderTreeIterator; import org.forester.util.AsciiHistogram; import org.forester.util.DescriptiveStatistics; import org.forester.util.ForesterUtil; -import org.forester.ws.uniprot.UniProtTaxonomy; +import org.forester.ws.seqdb.UniProtTaxonomy; public final class AptxUtil { diff --git a/forester/java/src/org/forester/archaeopteryx/tools/AncestralTaxonomyInferrer.java b/forester/java/src/org/forester/archaeopteryx/tools/AncestralTaxonomyInferrer.java index ec8ba76..55a740d 100644 --- a/forester/java/src/org/forester/archaeopteryx/tools/AncestralTaxonomyInferrer.java +++ b/forester/java/src/org/forester/archaeopteryx/tools/AncestralTaxonomyInferrer.java @@ -34,7 +34,7 @@ import org.forester.analysis.AncestralTaxonomyInferenceException; import org.forester.archaeopteryx.MainFrameApplication; import org.forester.archaeopteryx.TreePanel; import org.forester.phylogeny.Phylogeny; -import org.forester.ws.uniprot.SequenceDbWsTools; +import org.forester.ws.seqdb.SequenceDbWsTools; public class AncestralTaxonomyInferrer extends RunnableProcess { diff --git a/forester/java/src/org/forester/archaeopteryx/tools/SequenceDataRetriver.java b/forester/java/src/org/forester/archaeopteryx/tools/SequenceDataRetriver.java index d389aec..508d60f 100644 --- a/forester/java/src/org/forester/archaeopteryx/tools/SequenceDataRetriver.java +++ b/forester/java/src/org/forester/archaeopteryx/tools/SequenceDataRetriver.java @@ -43,8 +43,8 @@ import org.forester.phylogeny.data.Taxonomy; import org.forester.phylogeny.iterators.PhylogenyNodeIterator; import org.forester.util.ForesterUtil; import org.forester.util.SequenceIdParser; -import org.forester.ws.uniprot.SequenceDatabaseEntry; -import org.forester.ws.uniprot.SequenceDbWsTools; +import org.forester.ws.seqdb.SequenceDatabaseEntry; +import org.forester.ws.seqdb.SequenceDbWsTools; public final class SequenceDataRetriver extends RunnableProcess { -- 1.7.10.2