From 10b678ebd64a6ae54d45d1c92acf8de2fb3133ff Mon Sep 17 00:00:00 2001
From: amwaterhouse <Andrew Waterhouse>
Date: Fri, 28 Apr 2006 12:34:28 +0000
Subject: [PATCH] Edit menu added

---
 src/jalview/gui/PopupMenu.java |   91 +++++++++++++++++++++++++++++++++++++---
 1 file changed, 86 insertions(+), 5 deletions(-)

diff --git a/src/jalview/gui/PopupMenu.java b/src/jalview/gui/PopupMenu.java
index 4f2326a..968262b 100755
--- a/src/jalview/gui/PopupMenu.java
+++ b/src/jalview/gui/PopupMenu.java
@@ -68,8 +68,13 @@ public class PopupMenu extends JPopupMenu
     JCheckBoxMenuItem showBoxes = new JCheckBoxMenuItem();
     JCheckBoxMenuItem showText = new JCheckBoxMenuItem();
     JCheckBoxMenuItem showColourText = new JCheckBoxMenuItem();
+  JMenu jMenu1 = new JMenu();
+  JMenuItem cut = new JMenuItem();
+  JMenuItem copy = new JMenuItem();
+  JMenuItem upperCase = new JMenuItem();
+  JMenuItem lowerCase = new JMenuItem();
 
-    /**
+  /**
      * Creates a new PopupMenu object.
      *
      * @param ap DOCUMENT ME!
@@ -227,6 +232,8 @@ public class PopupMenu extends JPopupMenu
             showColourText.setSelected(sg.getColourText());
             showBoxes.setSelected(sg.getDisplayBoxes());
         }
+        else
+          groupMenu.setVisible(false);
 
         if (!ap.av.alignment.getGroups().contains(sg))
         {
@@ -284,7 +291,7 @@ public class PopupMenu extends JPopupMenu
     private void jbInit() throws Exception
     {
         groupMenu.setText("Group");
-        groupMenu.setText("Define");
+        groupMenu.setText("Group");
         groupName.setText("Name");
         groupName.addActionListener(new java.awt.event.ActionListener()
             {
@@ -355,9 +362,43 @@ public class PopupMenu extends JPopupMenu
                     showColourText_actionPerformed(e);
                 }
             });
-        add(groupMenu);
+    jMenu1.setText("Edit");
+    cut.setText("Cut");
+    cut.addActionListener(new ActionListener()
+    {
+      public void actionPerformed(ActionEvent e)
+      {
+        cut_actionPerformed(e);
+      }
+    });
+    upperCase.setText("To Upper Case");
+    upperCase.addActionListener(new ActionListener()
+    {
+      public void actionPerformed(ActionEvent e)
+      {
+        upperCase_actionPerformed(e);
+      }
+    });
+    copy.setText("Copy");
+    copy.addActionListener(new ActionListener()
+    {
+      public void actionPerformed(ActionEvent e)
+      {
+        copy_actionPerformed(e);
+      }
+    });
+    lowerCase.setText("To Lower Case");
+    lowerCase.addActionListener(new ActionListener()
+    {
+      public void actionPerformed(ActionEvent e)
+      {
+        lowerCase_actionPerformed(e);
+      }
+    });
+    add(groupMenu);
         add(sequenceMenu);
-        groupMenu.add(groupName);
+    this.add(jMenu1);
+    groupMenu.add(groupName);
         groupMenu.addSeparator();
         groupMenu.add(unGroupMenuItem);
         groupMenu.add(colourMenu);
@@ -406,7 +447,11 @@ public class PopupMenu extends JPopupMenu
         colourMenu.addSeparator();
         colourMenu.add(abovePIDColour);
         colourMenu.add(conservationMenuItem);
-        noColourmenuItem.setText("None");
+    jMenu1.add(copy);
+    jMenu1.add(cut);
+    jMenu1.add(upperCase);
+    jMenu1.add(lowerCase);
+    noColourmenuItem.setText("None");
         noColourmenuItem.addActionListener(new java.awt.event.ActionListener()
             {
                 public void actionPerformed(ActionEvent e)
@@ -988,4 +1033,40 @@ public class PopupMenu extends JPopupMenu
         refresh();
     }
 
+  public void copy_actionPerformed(ActionEvent e)
+  {
+    ap.alignFrame.copy_actionPerformed(null);
+  }
+
+  public void cut_actionPerformed(ActionEvent e)
+  {
+    ap.alignFrame.cut_actionPerformed(null);
+  }
+
+  public void upperCase_actionPerformed(ActionEvent e)
+  {
+    SequenceGroup sg = ap.av.getSelectionGroup();
+    if(sg==null)
+      return;
+
+    for(int g=0; g<sg.getSize(); g++)
+    {
+      sg.getSequenceAt(g).changeCase(true, sg.getStartRes(), sg.getEndRes()+1);
+    }
+    ap.repaint();
+  }
+
+  public void lowerCase_actionPerformed(ActionEvent e)
+  {
+    SequenceGroup sg = ap.av.getSelectionGroup();
+    if(sg==null)
+      return;
+
+    for(int g=0; g<sg.getSize(); g++)
+    {
+      sg.getSequenceAt(g).changeCase(false, sg.getStartRes(), sg.getEndRes()+1);
+    }
+    ap.repaint();
+  }
+
 }
-- 
1.7.10.2