From 11f9bc4d774182d8868d97cc4810a23c861ed82d Mon Sep 17 00:00:00 2001
From: jprocter <jprocter@compbio.dundee.ac.uk>
Date: Tue, 30 Aug 2011 14:02:46 +0100
Subject: [PATCH] JAL-715 rsbs service editing

---
 src/jalview/gui/WsPreferences.java |   78 ++++++++++++++++++++++++++++++++++--
 1 file changed, 74 insertions(+), 4 deletions(-)

diff --git a/src/jalview/gui/WsPreferences.java b/src/jalview/gui/WsPreferences.java
index b88f27e..5258a4c 100644
--- a/src/jalview/gui/WsPreferences.java
+++ b/src/jalview/gui/WsPreferences.java
@@ -31,6 +31,7 @@ import javax.swing.JTextField;
 
 import jalview.bin.Cache;
 import jalview.jbgui.GWsPreferences;
+import jalview.ws.rest.RestServiceDescription;
 
 public class WsPreferences extends GWsPreferences
 {
@@ -41,7 +42,7 @@ public class WsPreferences extends GWsPreferences
     initFromPreferences();
   }
 
-  Vector<String> wsUrls, oldUrls;
+  Vector<String> wsUrls, oldUrls,rsbsUrls,oldRsbsUrls;
 
   private boolean needWsMenuUpdate;
 
@@ -62,6 +63,17 @@ public class WsPreferences extends GWsPreferences
       wsUrls = new Vector<String>();
     }
     updateList();
+    rsbsUrls = jalview.ws.rest.RestClient.getRsbsDescriptions();
+    if (rsbsUrls != null)
+    {
+      oldRsbsUrls = new Vector<String>(rsbsUrls);
+    }
+    else
+    {
+      oldRsbsUrls = null;
+      rsbsUrls = new Vector<String>();
+    }
+    updateRsbsList();
     enableEnfinServices.setSelected(oldEnfin = Cache.getDefault(
             "SHOW_ENFIN_SERVICES", true));
     enableEnfinServices.addActionListener(updateAction);
@@ -97,11 +109,21 @@ public class WsPreferences extends GWsPreferences
     wsList.setListData(wsUrls);
   }
 
+  private void updateRsbsList()
+  {
+    sbrsList.setListData(rsbsUrls);
+  }
+
   private void updateServiceList()
   {
     jalview.ws.jws2.Jws2Discoverer.setServiceUrls(wsUrls);
   }
 
+  private void updateRsbsServiceList()
+  {
+    jalview.ws.rest.RestClient.setRsbsServices(rsbsUrls);
+  }
+
   /*
    * (non-Javadoc)
    * 
@@ -133,7 +155,7 @@ public class WsPreferences extends GWsPreferences
     int sel = wsList.getSelectedIndex();
     if (sel > -1)
     {
-      String url = editUrl(wsUrls.elementAt(sel), "Edit JWS2 URL");
+      String url = editUrl(wsUrls.elementAt(sel), "Edit JABAWS URL");
       if (url != null)
       {
         int present = wsUrls.indexOf(url);
@@ -154,7 +176,46 @@ public class WsPreferences extends GWsPreferences
       }
     }
   }
-
+  @Override
+  protected void newSbrsUrl_actionPerformed(ActionEvent e)
+  {
+    RestServiceEditorPane rse = new RestServiceEditorPane();
+    rse.showDialog("Add a new Simple Bioinformatics Rest Service");
+    String rservice = rse.getEditedRestService();
+    if (rservice!=null && !rsbsUrls.contains(rservice))
+    {
+      rsbsUrls.add(rservice);
+      update++;
+      updateRsbsList();
+    }
+  }
+  @Override
+  protected void editSbrsUrl_actionPerformed(ActionEvent e)
+  {
+    int sel = sbrsList.getSelectedIndex();
+    if (sel > -1)
+    {
+      RestServiceEditorPane rse = new RestServiceEditorPane(new RestServiceDescription(rsbsUrls.elementAt(sel)));
+      rse.showDialog("Edit Simple Bioinformatics Rest Service entry");
+      String rservice = rse.getEditedRestService();
+      if (rservice!=null)
+      {
+        int present = rsbsUrls.indexOf(rservice);
+        if (present==-1) {
+          update++;
+          rsbsUrls.setElementAt(rservice,sel);
+          updateRsbsList();
+        } else {
+          if (present!=sel) {
+            rsbsUrls.removeElementAt(sel);
+            update++;
+            updateRsbsList();
+          }
+        }
+      }
+    }
+  }
+  
   void updateWsMenuConfig(boolean old)
   {
     if (old)
@@ -164,6 +225,11 @@ public class WsPreferences extends GWsPreferences
         update++;
       }
       wsUrls = (oldUrls == null) ? null : new Vector(oldUrls);
+      if (oldRsbsUrls!=rsbsUrls || (rsbsUrls!=null && oldRsbsUrls!=null && !oldRsbsUrls.equals(rsbsUrls)))
+      {
+        update++;
+      }
+      oldRsbsUrls = (oldRsbsUrls == null) ? null : new Vector(oldRsbsUrls);
     }
     else
     {
@@ -190,9 +256,11 @@ public class WsPreferences extends GWsPreferences
             "WSMENU_BYTYPE",
             Boolean.valueOf(old ? oldIndexByType : indexByType.isSelected())
                     .toString());
+    
     Cache.setProperty("SHOW_WSDISCOVERY_ERRORS",
             Boolean.valueOf(old ? oldWsWarning : displayWsWarning.isSelected()).toString());
     updateServiceList();
+    updateRsbsServiceList();
   }
 
   /*
@@ -213,6 +281,7 @@ public class WsPreferences extends GWsPreferences
       wsUrls.setElementAt(t, p);
       updateList();
       wsList.setSelectedIndex(p + 1);
+      update++;
     }
   }
 
@@ -234,6 +303,7 @@ public class WsPreferences extends GWsPreferences
       wsUrls.setElementAt(t, p);
       updateList();
       wsList.setSelectedIndex(p - 1);
+      update++;
     }
   }
 
@@ -316,7 +386,7 @@ public class WsPreferences extends GWsPreferences
   @Override
   protected void newWsUrl_actionPerformed(ActionEvent e)
   {
-    String url = editUrl(null, "Add new JWS2 URL");
+    String url = editUrl(null, "Add new JABAWS URL");
     if (url != null)
     {
       if (!wsUrls.contains(url))
-- 
1.7.10.2