From 1a28391e79e7b8e84576336f59ff3038a8e6e85b Mon Sep 17 00:00:00 2001 From: Jim Procter Date: Sun, 28 Jun 2015 17:18:59 +0100 Subject: [PATCH] JAL-1705 add concrete ENSEMBL sequence fetchers --- src/jalview/ws/SequenceFetcher.java | 6 ++++++ 1 file changed, 6 insertions(+) diff --git a/src/jalview/ws/SequenceFetcher.java b/src/jalview/ws/SequenceFetcher.java index 8776747..656fa1d 100644 --- a/src/jalview/ws/SequenceFetcher.java +++ b/src/jalview/ws/SequenceFetcher.java @@ -55,6 +55,12 @@ public class SequenceFetcher extends ASequenceFetcher public SequenceFetcher(boolean addDas) { + addDBRefSourceImpl(jalview.ext.ensembl.EnsemblProtein.class); + addDBRefSourceImpl(jalview.ext.ensembl.EnsemblTranscript.class); + addDBRefSourceImpl(jalview.ext.ensembl.EnsemblCds.class); + addDBRefSourceImpl(jalview.ext.ensembl.EnsemblGenome.class); + addDBRefSourceImpl(jalview.ext.ensembl.EnsemblCdna.class); + addDBRefSourceImpl(jalview.ws.dbsources.EmblSource.class); addDBRefSourceImpl(jalview.ws.dbsources.EmblCdsSouce.class); addDBRefSourceImpl(jalview.ws.dbsources.Uniprot.class); -- 1.7.10.2