From 1aa2d47867aa494c8818ed48c59b1b826f25e069 Mon Sep 17 00:00:00 2001
From: Jim Procter <jprocter@issues.jalview.org>
Date: Fri, 16 Sep 2016 20:23:07 +0100
Subject: [PATCH] =?utf8?q?JAL-2189=20clear=20out=20old=20what=E2=80=99s=20ne?=
 =?utf8?q?w=20and=20add=20ensembl=20and=20uniprot?=
MIME-Version: 1.0
Content-Type: text/plain; charset=utf8
Content-Transfer-Encoding: 8bit

---
 help/help.jhm    |    4 ++++
 help/helpTOC.xml |    8 +++-----
 2 files changed, 7 insertions(+), 5 deletions(-)

diff --git a/help/help.jhm b/help/help.jhm
index ce98085..53b09e5 100755
--- a/help/help.jhm
+++ b/help/help.jhm
@@ -144,6 +144,10 @@
    <mapID target="selectcolbyannot" url="html/features/columnFilterByAnnotation.html" />
    <mapID target="biojsmsa" url="html/features/biojsmsa.html" />
    
+   <mapID target="ensemblfetch" url="html/features/ensemblsequencefetcher.html" />
+   
+   <mapID target="uniprotfetcher" url="html/features/uniprotsequencefetcher.html" />
+   
    <mapID target="backIcon" url="icons/back.png" />
    <mapID target="forwardIcon" url="icons/forward.png" />
    <mapID target="homeIcon" url="icons/Home.png" />
diff --git a/help/helpTOC.xml b/help/helpTOC.xml
index a6145c1..c4476fd 100755
--- a/help/helpTOC.xml
+++ b/help/helpTOC.xml
@@ -23,11 +23,9 @@
 <!-- DO NOT WRAP THESE LINES - help2Website relies on each item being on one line! -->
 	<tocitem text="Jalview Documentation" target="home" expand="true">
 			<tocitem text="What's new" target="new" expand="true">
-				<tocitem text="Split Frame View" target="splitframe" />
-				<tocitem text="PDB Sequence Fetcher" target="pdbfetcher" />
-				<tocitem text="PDB Structure Chooser" target="pdbchooser" />
-				<tocitem text="Chimera Viewer" target="chimera" />
-				<tocitem text="Select Columns by Annotation" target="selectcolbyannot" />
+				<tocitem text="Retrieval from ENSEMBL" target="ensemblfetch" />
+				<tocitem text="UniProt Free Text Search" target="uniprotfetcher" />
+				
 				<tocitem text="Latest Release Notes" target="release"/>
 		</tocitem>
 		
-- 
1.7.10.2