From 1b49016390b105f5090cf5f4d8bb69631cbdbf5a Mon Sep 17 00:00:00 2001 From: jprocter <jprocter@compbio.dundee.ac.uk> Date: Thu, 28 Jun 2007 20:16:43 +0000 Subject: [PATCH] debug message for default mapping git-svn-id: https://svn.lifesci.dundee.ac.uk/svn/repository/trunk@422 be28352e-c001-0410-b1a7-c7978e42abec --- src/uk/ac/vamsas/objects/utils/Range.java | 10 ++++++++++ 1 file changed, 10 insertions(+) diff --git a/src/uk/ac/vamsas/objects/utils/Range.java b/src/uk/ac/vamsas/objects/utils/Range.java index f66df31..e9c2eff 100644 --- a/src/uk/ac/vamsas/objects/utils/Range.java +++ b/src/uk/ac/vamsas/objects/utils/Range.java @@ -15,6 +15,7 @@ import uk.ac.vamsas.objects.core.Seg; * */ public class Range { + static org.apache.commons.logging.Log log = org.apache.commons.logging.LogFactory.getFactory().getLog(Range.class); /** * get start<end range of segment, adjusting for inclusivity flag and @@ -236,6 +237,15 @@ public class Range { */ public static MapList parsemapType(MapType map) { + if (!map.getLocal().hasUnit() || map.getMapped().hasUnit()) + { + if (log.isDebugEnabled()) + { + log.debug( + "using default mapping length of 1:1 for map " + +(map.isRegistered() ? map.getVorbaId().toString() : ("<no Id registered> "+map.toString()))); + } + } return parsemapType(map, 1, 1); } -- 1.7.10.2