From 1d6bdfa4ce1d88c055a257e542de6b8542144d91 Mon Sep 17 00:00:00 2001 From: amwaterhouse Date: Fri, 26 Jan 2007 17:30:49 +0000 Subject: [PATCH] Only set the sequence oncecvs diff datamodel/Alignment.java --- src/jalview/datamodel/Alignment.java | 8 +++++--- 1 file changed, 5 insertions(+), 3 deletions(-) diff --git a/src/jalview/datamodel/Alignment.java b/src/jalview/datamodel/Alignment.java index 2ad0588..8b159a6 100755 --- a/src/jalview/datamodel/Alignment.java +++ b/src/jalview/datamodel/Alignment.java @@ -397,9 +397,11 @@ public class Alignment implements AlignmentI for (int i = 0; i < sequences.size(); i++) { Sequence seq = (Sequence) sequences.elementAt(i); - seq.setSequence( seq.getSequenceAsString().replace('.', gc) ); - seq.setSequence( seq.getSequenceAsString().replace('-', gc) ); - seq.setSequence( seq.getSequenceAsString().replace(' ', gc) ); + seq.setSequence(seq.getSequenceAsString() + .replace('.', gc) + .replace('-', gc) + .replace(' ', gc) + ); } } -- 1.7.10.2