From 27acd1da0c700e7a4390095501be0cd86955c7ef Mon Sep 17 00:00:00 2001 From: jprocter Date: Fri, 13 Jul 2007 14:58:41 +0000 Subject: [PATCH] comments for future viz/detection of internal sequence nodes. --- src/jalview/analysis/NJTree.java | 8 ++++++-- 1 file changed, 6 insertions(+), 2 deletions(-) diff --git a/src/jalview/analysis/NJTree.java b/src/jalview/analysis/NJTree.java index 88bb51c..3569be1 100755 --- a/src/jalview/analysis/NJTree.java +++ b/src/jalview/analysis/NJTree.java @@ -794,13 +794,13 @@ public class NJTree * @return Vector of leaf nodes on binary tree */ public Vector findLeaves(SequenceNode node, Vector leaves) - { + { if (node == null) { return leaves; } - if ( (node.left() == null) && (node.right() == null)) + if ( (node.left() == null) && (node.right() == null)) // Interior node detection { leaves.addElement(node); @@ -808,6 +808,10 @@ public class NJTree } else { +/* TODO: Identify internal nodes... if (node.isSequenceLabel()) + { + leaves.addElement(node); + }*/ findLeaves( (SequenceNode) node.left(), leaves); findLeaves( (SequenceNode) node.right(), leaves); } -- 1.7.10.2