From 2fa618ed4a7e6c1b8e5707b5aa8f288ac41de873 Mon Sep 17 00:00:00 2001 From: "cmzmasek@gmail.com" Date: Sat, 9 Nov 2013 05:48:57 +0000 Subject: [PATCH] inprogress --- forester/ruby/evoruby/exe/run_phylo_pipeline_x.rb | 4 ++++ 1 file changed, 4 insertions(+) diff --git a/forester/ruby/evoruby/exe/run_phylo_pipeline_x.rb b/forester/ruby/evoruby/exe/run_phylo_pipeline_x.rb index 0117b6a..50de838 100644 --- a/forester/ruby/evoruby/exe/run_phylo_pipeline_x.rb +++ b/forester/ruby/evoruby/exe/run_phylo_pipeline_x.rb @@ -113,6 +113,10 @@ module Evoruby FileUtils.cp orig_input, "#{hmm_name}/#{orig_input}" end + Dir.mkdir( hmm_name + "/msa" ) + + FileUtils.cp "#{hmm_name}/#{hmm_name}__#{hmm_name}__ee#{e_value_exp.to_s}_#{length}.fasta", "#{hmm_name}/msa/#{hmm_name}__#{hmm_name}__ee#{e_value_exp.to_s}_#{length}" + end end -- 1.7.10.2