From 303cf24674d8cb8200c6d2880d6ff72d25ba32da Mon Sep 17 00:00:00 2001 From: Jim Procter Date: Wed, 29 Jul 2020 17:46:17 +0100 Subject: [PATCH] JAL-3675 JAL-3570 JAL-3608 JAL-2983 release notes and docs --- help/help/html/features/commandline.html | 27 ++++++++++++++++++++++++--- help/help/html/releases.html | 20 +++++++++++++++++--- 2 files changed, 41 insertions(+), 6 deletions(-) diff --git a/help/help/html/features/commandline.html b/help/help/html/features/commandline.html index e00d390..f0e04d5 100644 --- a/help/help/html/features/commandline.html +++ b/help/help/html/features/commandline.html @@ -65,10 +65,31 @@ open /Applications/Jalview.app --args -open ~/myalignment.fa(put

Passing JVM Arguments to Jalview
If you need - to modify parameters for Jalview's Java Virtual Machine, then take a - look at the instructions for how to setting - the JVM's maximum memory. + to modify parameters for Jalview's Java Virtual Machine, or + configure system properties, then take a look at the instructions + for how to setting the JVM's + maximum memory.
+

+ Changing Jalview's 'Look and Feel'
If you + are experiencing issues with the font size or layout of Jalview's + GUI, you can try changing Jalview's 'Look and feel' by + specifying a custom system property 'laf' on startup (see setting the JVM's memory for + instructions on how to do this for your platform).
For the + Jalview standalone executable jar, simply provide one of the + property settings before the -jar argument

+ + The currently configured look and feel is logged to Jalview's console. + Once the look and feel has been changed, it will be stored in + Jalview's .jalview_properties file for future Jalview sessions. +

 

 

diff --git a/help/help/html/releases.html b/help/help/html/releases.html index 3512375..b264a3f 100755 --- a/help/help/html/releases.html +++ b/help/help/html/releases.html @@ -76,12 +76,22 @@ li:before { improved compatibility with JalviewJS
  • - Retrieve GZipped stockholm formatted alignments from Pfam and Rfam + Retrieve GZipped stockholm formatted + alignments from Pfam and Rfam
  • - Recognise GZipped content for URLs and File import (no longer based on .gz extension) + Recognise GZipped content for URLs and File + import (no longer based on .gz extension) +
  • +
  • + Updated Spanish Translation for 2.11.1 +
  • + Launching Jalview + @@ -108,6 +118,10 @@ li:before { when there are both local and complementary features mapped to the position under the cursor +
  • + Slider with negative range values not + rendered correctly in VAqua4 (Since 2.10.4) +
  • -- 1.7.10.2